RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 COL24A1Q17RW2 1714 aa18.04■□□□□ 0.48
VPS25-201ENST00000253794 GYS1P13807 737 aa18.04■□□□□ 0.48
VPS25-201ENST00000253794 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
VPS25-201ENST00000253794 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
VPS25-201ENST00000253794 TBC1D2BQ9UPU7 963 aa18.04■□□□□ 0.48
VPS25-201ENST00000253794 ZPR1O75312 459 aa18.03■□□□□ 0.48
VPS25-201ENST00000253794 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
VPS25-201ENST00000253794 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
VPS25-201ENST00000253794 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
VPS25-201ENST00000253794 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
VPS25-201ENST00000253794 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
VPS25-201ENST00000253794 ADCY9O60503 1353 aa18.03■□□□□ 0.48
VPS25-201ENST00000253794 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
VPS25-201ENST00000253794 KSR2Q6VAB6 950 aa18.02■□□□□ 0.48
VPS25-201ENST00000253794 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
VPS25-201ENST00000253794 ARHGAP45Q92619 1136 aa18.02■□□□□ 0.48
VPS25-201ENST00000253794 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
VPS25-201ENST00000253794 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
VPS25-201ENST00000253794 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
VPS25-201ENST00000253794 BCAR3O75815 825 aa18.01■□□□□ 0.47
VPS25-201ENST00000253794 AIMP1Q12904 312 aaKnown RBP18.01■□□□□ 0.47
VPS25-201ENST00000253794 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
VPS25-201ENST00000253794 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
VPS25-201ENST00000253794 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
VPS25-201ENST00000253794 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
VPS25-201ENST00000253794 MTFR1LQ9H019 292 aa18■□□□□ 0.47
VPS25-201ENST00000253794 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
VPS25-201ENST00000253794 PI4KAP2A4QPH2 592 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
VPS25-201ENST00000253794 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
VPS25-201ENST00000253794 FKBP8Q14318 412 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 HLFQ16534 295 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 ZBTB3Q9H5J0 574 aa17.99■□□□□ 0.47
VPS25-201ENST00000253794 NUP98P52948 1817 aa17.98■□□□□ 0.47
VPS25-201ENST00000253794 TM4SF1P30408 202 aa17.98■□□□□ 0.47
VPS25-201ENST00000253794 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
VPS25-201ENST00000253794 ZNF34Q8IZ26 560 aa17.98■□□□□ 0.47
VPS25-201ENST00000253794 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
VPS25-201ENST00000253794 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
VPS25-201ENST00000253794 ANKRD36CQ5JPF3 1778 aa17.98■□□□□ 0.47
VPS25-201ENST00000253794 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
VPS25-201ENST00000253794 MSH5O43196 834 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 DNAAF4Q8WXU2 420 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 ISCA1Q9BUE6 129 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
VPS25-201ENST00000253794 MAP3K2Q9Y2U5 619 aa17.97■□□□□ 0.47
VPS25-201ENST00000253794 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
VPS25-201ENST00000253794 ARXQ96QS3 562 aa17.96■□□□□ 0.47
VPS25-201ENST00000253794 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
VPS25-201ENST00000253794 NFIXQ14938 502 aa17.95■□□□□ 0.46
VPS25-201ENST00000253794 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
VPS25-201ENST00000253794 ABCC4O15439 1325 aa17.95■□□□□ 0.46
VPS25-201ENST00000253794 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
VPS25-201ENST00000253794 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 TRIM27P14373 513 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 ZKSCAN2Q63HK3 967 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 NRXN2Q9P2S2 1712 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
VPS25-201ENST00000253794 F6X3S4 739 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
VPS25-201ENST00000253794 ZBTB7AO95365 584 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 DDR1Q08345 913 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 BEND3Q5T5X7 828 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 LINS1Q8NG48 757 aa17.93■□□□□ 0.46
VPS25-201ENST00000253794 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
VPS25-201ENST00000253794 PTGER2P43116 358 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 NEXNQ0ZGT2 675 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 SETDB2Q96T68 719 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 MYD88Q99836 296 aa17.92■□□□□ 0.46
VPS25-201ENST00000253794 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
VPS25-201ENST00000253794 MMP10P09238 476 aa17.91■□□□□ 0.46
VPS25-201ENST00000253794 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
VPS25-201ENST00000253794 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.91■□□□□ 0.46
VPS25-201ENST00000253794 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
VPS25-201ENST00000253794 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
VPS25-201ENST00000253794 MS4A1P11836 297 aa17.9■□□□□ 0.46
VPS25-201ENST00000253794 INTS3Q68E01 1043 aaKnown RBP17.9■□□□□ 0.46
VPS25-201ENST00000253794 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
VPS25-201ENST00000253794 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.46
VPS25-201ENST00000253794 NTSR2O95665 410 aa17.89■□□□□ 0.45
VPS25-201ENST00000253794 GPTP24298 496 aa17.89■□□□□ 0.45
VPS25-201ENST00000253794 CCT4P50991 539 aaKnown RBP17.89■□□□□ 0.45
VPS25-201ENST00000253794 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 SERPINB2P05120 415 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 POLD1P28340 1107 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 RRP1P56182 461 aaKnown RBP17.88■□□□□ 0.45
VPS25-201ENST00000253794 PDE3AQ14432 1141 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
VPS25-201ENST00000253794 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms