RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TAF7Q15545 349 aaPredicted RBP24.03■■□□□ 1.44
HOXC13-201ENST00000243056 CARD10Q9BWT7 1032 aa24.03■■□□□ 1.44
HOXC13-201ENST00000243056 NSFL1CQ9UNZ2 370 aaKnown RBP24.03■■□□□ 1.44
HOXC13-201ENST00000243056 CYP2E1P05181 493 aaPredicted RBP24.02■■□□□ 1.44
HOXC13-201ENST00000243056 PHKG2P15735 406 aa24.02■■□□□ 1.44
HOXC13-201ENST00000243056 C8orf37Q96NL8 207 aa24.02■■□□□ 1.44
HOXC13-201ENST00000243056 NOB1Q9ULX3 412 aaKnown RBP24.02■■□□□ 1.44
HOXC13-201ENST00000243056 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
HOXC13-201ENST00000243056 TEFQ10587 303 aa24.01■■□□□ 1.43
HOXC13-201ENST00000243056 SPTLC3Q9NUV7 552 aa24.01■■□□□ 1.43
HOXC13-201ENST00000243056 SPG7Q9UQ90 795 aa24.01■■□□□ 1.43
HOXC13-201ENST00000243056 CEMIPQ8WUJ3 1361 aa24.01■■□□□ 1.43
HOXC13-201ENST00000243056 RIOK3O14730 519 aaKnown RBP24■■□□□ 1.43
HOXC13-201ENST00000243056 IL2RBP14784 551 aa24■■□□□ 1.43
HOXC13-201ENST00000243056 SLC39A6Q13433 755 aa24■■□□□ 1.43
HOXC13-201ENST00000243056 TIGD1Q96MW7 591 aa24■■□□□ 1.43
HOXC13-201ENST00000243056 KIF16BQ96L93 1317 aa23.99■■□□□ 1.43
HOXC13-201ENST00000243056 NFATC2IPQ8NCF5 419 aa23.99■■□□□ 1.43
HOXC13-201ENST00000243056 TTC12Q9H892 705 aaPredicted RBP23.99■■□□□ 1.43
HOXC13-201ENST00000243056 ZCRB1Q8TBF4 217 aaKnown RBP23.98■■□□□ 1.43
HOXC13-201ENST00000243056 CCDC9Q9Y3X0 531 aaKnown RBP23.98■■□□□ 1.43
HOXC13-201ENST00000243056 COL22A1Q8NFW1 1626 aaPredicted RBP23.98■■□□□ 1.43
HOXC13-201ENST00000243056 CCDC66A2RUB6 948 aa23.98■■□□□ 1.43
HOXC13-201ENST00000243056 BTBD11A6QL63 1104 aa23.98■■□□□ 1.43
HOXC13-201ENST00000243056 TULP2O00295 520 aa23.98■■□□□ 1.43
HOXC13-201ENST00000243056 MVPQ14764 893 aaKnown RBP23.98■■□□□ 1.43
HOXC13-201ENST00000243056 CHAMP1Q96JM3 812 aa23.97■■□□□ 1.43
HOXC13-201ENST00000243056 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
HOXC13-201ENST00000243056 KDM6AO15550 1401 aaPredicted RBP23.96■■□□□ 1.43
HOXC13-201ENST00000243056 PRAMEF22A3QJZ6 481 aa23.96■■□□□ 1.43
HOXC13-201ENST00000243056 CTIFO43310 598 aaKnown RBP23.96■■□□□ 1.43
HOXC13-201ENST00000243056 TRIM27P14373 513 aa23.96■■□□□ 1.43
HOXC13-201ENST00000243056 NGLY1Q96IV0 654 aa23.96■■□□□ 1.43
HOXC13-201ENST00000243056 ABCC6O95255 1503 aa23.96■■□□□ 1.43
HOXC13-201ENST00000243056 TRIM6-TRIM34B2RNG4 842 aa23.95■■□□□ 1.43
HOXC13-201ENST00000243056 NUCB2P80303 420 aa23.95■■□□□ 1.43
HOXC13-201ENST00000243056 TRIM34Q9BYJ4 488 aa23.95■■□□□ 1.43
HOXC13-201ENST00000243056 MRPL50Q8N5N7 158 aaKnown RBP23.94■■□□□ 1.42
HOXC13-201ENST00000243056 CTNNA3Q9UI47 895 aa23.94■■□□□ 1.42
HOXC13-201ENST00000243056 OVOS2A0A0G2JMS6 1433 aa23.94■■□□□ 1.42
HOXC13-201ENST00000243056 CT47B1P0C2W7 299 aaPredicted RBP23.94■■□□□ 1.42
HOXC13-201ENST00000243056 JCADQ9P266 1359 aa23.93■■□□□ 1.42
HOXC13-201ENST00000243056 HDAC1Q13547 482 aaPredicted RBP23.93■■□□□ 1.42
HOXC13-201ENST00000243056 TERF2Q15554 542 aa23.93■■□□□ 1.42
HOXC13-201ENST00000243056 EIF2S2P20042 333 aaKnown RBP23.92■■□□□ 1.42
HOXC13-201ENST00000243056 ZBTB9Q96C00 473 aa23.92■■□□□ 1.42
HOXC13-201ENST00000243056 NCBP1Q09161 790 aaKnown RBP23.92■■□□□ 1.42
HOXC13-201ENST00000243056 ZKSCAN2Q63HK3 967 aa23.92■■□□□ 1.42
HOXC13-201ENST00000243056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.92■■□□□ 1.42
HOXC13-201ENST00000243056 LRRC37A3O60309 1634 aa23.91■■□□□ 1.42
HOXC13-201ENST00000243056 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
HOXC13-201ENST00000243056 G2E3Q7L622 706 aa23.91■■□□□ 1.42
HOXC13-201ENST00000243056 TSPY26PQ9H489 355 aa23.91■■□□□ 1.42
HOXC13-201ENST00000243056 EIF4A1P60842 406 aaKnown RBP23.9■■□□□ 1.42
HOXC13-201ENST00000243056 DDX41Q9UJV9 622 aaKnown RBP23.9■■□□□ 1.42
HOXC13-201ENST00000243056 ANXA1P04083 346 aa23.9■■□□□ 1.42
HOXC13-201ENST00000243056 SLC4A2P04920 1241 aa23.9■■□□□ 1.42
HOXC13-201ENST00000243056 ALDH1L2Q3SY69 923 aa23.89■■□□□ 1.42
HOXC13-201ENST00000243056 ATF7IPQ6VMQ6 1270 aa23.89■■□□□ 1.42
HOXC13-201ENST00000243056 SLC52A2Q9HAB3 445 aa23.89■■□□□ 1.42
HOXC13-201ENST00000243056 DIAPH3Q9NSV4 1193 aa23.89■■□□□ 1.42
HOXC13-201ENST00000243056 LRP6O75581 1613 aa23.89■■□□□ 1.41
HOXC13-201ENST00000243056 ZDHHC9Q9Y397 364 aa23.89■■□□□ 1.41
HOXC13-201ENST00000243056 EP400Q96L91 3159 aa23.88■■□□□ 1.41
HOXC13-201ENST00000243056 DCAF5Q96JK2 942 aa23.88■■□□□ 1.41
HOXC13-201ENST00000243056 DZIP1LQ8IYY4 767 aaKnown RBP23.88■■□□□ 1.41
HOXC13-201ENST00000243056 KAT6BQ8WYB5 2073 aa23.87■■□□□ 1.41
HOXC13-201ENST00000243056 PCDH11XQ9BZA7 1347 aa23.87■■□□□ 1.41
HOXC13-201ENST00000243056 PCDH11YQ9BZA8 1340 aa23.87■■□□□ 1.41
HOXC13-201ENST00000243056 ERICH4A6NGS2 130 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 TMEM57Q8N5G2 664 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 USP25Q9UHP3 1055 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 SPATA31A1Q5TZJ5 1347 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 CABP4P57796 275 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 LNPKQ9C0E8 428 aa23.86■■□□□ 1.41
HOXC13-201ENST00000243056 MORC2Q9Y6X9 1032 aaPredicted RBP23.85■■□□□ 1.41
HOXC13-201ENST00000243056 ITPRIPQ8IWB1 547 aa23.85■■□□□ 1.41
HOXC13-201ENST00000243056 CHAF1AQ13111 956 aaPredicted RBP23.84■■□□□ 1.41
HOXC13-201ENST00000243056 FAM98CQ17RN3 349 aaKnown RBP23.84■■□□□ 1.41
HOXC13-201ENST00000243056 A0A0G2JS52 829 aa23.84■■□□□ 1.41
HOXC13-201ENST00000243056 TBC1D9Q6ZT07 1266 aa23.84■■□□□ 1.41
HOXC13-201ENST00000243056 TRERF1Q96PN7 1200 aa23.84■■□□□ 1.41
HOXC13-201ENST00000243056 CALCOCO1Q9P1Z2 691 aa23.84■■□□□ 1.41
HOXC13-201ENST00000243056 F6X3S4 739 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 PIP4K2AP48426 406 aaPredicted RBP23.83■■□□□ 1.41
HOXC13-201ENST00000243056 NUCB1Q02818 461 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 BMP2KLQ5H9B9 411 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 ZNF790Q6PG37 636 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.41
HOXC13-201ENST00000243056 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 ZGPATQ8N5A5 531 aaKnown RBP23.83■■□□□ 1.41
HOXC13-201ENST00000243056 CHMP4CQ96CF2 233 aa23.83■■□□□ 1.41
HOXC13-201ENST00000243056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.82■■□□□ 1.4
HOXC13-201ENST00000243056 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
HOXC13-201ENST00000243056 PKD1L3Q7Z443 1732 aa23.82■■□□□ 1.4
HOXC13-201ENST00000243056 SLIT2O94813 1529 aa23.82■■□□□ 1.4
HOXC13-201ENST00000243056 PHAXQ9H814 394 aaKnown RBP23.82■■□□□ 1.4
HOXC13-201ENST00000243056 PYCARDQ9ULZ3 195 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms