RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 CDC45O75419 566 aa27.37■■□□□ 1.97
GCA-201ENST00000233612 SURF6O75683 361 aaKnown RBP27.37■■□□□ 1.97
GCA-201ENST00000233612 TBC1D9Q6ZT07 1266 aa27.36■■□□□ 1.97
GCA-201ENST00000233612 ERICH6Q7L0X2 663 aa27.36■■□□□ 1.97
GCA-201ENST00000233612 KIF1BPQ96EK5 621 aa27.36■■□□□ 1.97
GCA-201ENST00000233612 C22orf23Q9BZE7 217 aa27.36■■□□□ 1.97
GCA-201ENST00000233612 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
GCA-201ENST00000233612 JCADQ9P266 1359 aa27.35■■□□□ 1.97
GCA-201ENST00000233612 AOX1Q06278 1338 aa27.35■■□□□ 1.97
GCA-201ENST00000233612 A1BGP04217 495 aa27.35■■□□□ 1.97
GCA-201ENST00000233612 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
GCA-201ENST00000233612 NUTM2BA6NNL0 878 aaPredicted RBP27.34■■□□□ 1.97
GCA-201ENST00000233612 NUTM2EB1AL46 878 aaPredicted RBP27.34■■□□□ 1.97
GCA-201ENST00000233612 PIP4K2AP48426 406 aaPredicted RBP27.34■■□□□ 1.97
GCA-201ENST00000233612 NUTM2AQ8IVF1 878 aaPredicted RBP27.34■■□□□ 1.97
GCA-201ENST00000233612 RHPN1Q8TCX5 695 aa27.34■■□□□ 1.97
GCA-201ENST00000233612 NUP188Q5SRE5 1749 aa27.34■■□□□ 1.97
GCA-201ENST00000233612 DDB1Q16531 1140 aa27.33■■□□□ 1.97
GCA-201ENST00000233612 RBM25P49756 843 aaKnown RBP27.33■■□□□ 1.97
GCA-201ENST00000233612 MFAP1P55081 439 aaKnown RBP27.33■■□□□ 1.97
GCA-201ENST00000233612 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
GCA-201ENST00000233612 TUBGCP6Q96RT7 1819 aa27.31■■□□□ 1.96
GCA-201ENST00000233612 SDSP20132 328 aa27.31■■□□□ 1.96
GCA-201ENST00000233612 MX1P20591 662 aa27.31■■□□□ 1.96
GCA-201ENST00000233612 STARD3NLO95772 234 aa27.3■■□□□ 1.96
GCA-201ENST00000233612 UNC5CLQ8IV45 518 aa27.3■■□□□ 1.96
GCA-201ENST00000233612 BICC1Q9H694 974 aaKnown RBP27.3■■□□□ 1.96
GCA-201ENST00000233612 TTLL7Q6ZT98 887 aa27.3■■□□□ 1.96
GCA-201ENST00000233612 ERC1Q8IUD2 1116 aa27.3■■□□□ 1.96
GCA-201ENST00000233612 CASP7P55210 303 aa27.29■■□□□ 1.96
GCA-201ENST00000233612 DNAJC10Q8IXB1 793 aa27.28■■□□□ 1.96
GCA-201ENST00000233612 ANP32EQ9BTT0 268 aa27.28■■□□□ 1.96
GCA-201ENST00000233612 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
GCA-201ENST00000233612 H7C1W4 665 aa27.27■■□□□ 1.96
GCA-201ENST00000233612 DOT1LQ8TEK3 1739 aa27.26■■□□□ 1.96
GCA-201ENST00000233612 PRIM1P49642 420 aaKnown RBP27.26■■□□□ 1.95
GCA-201ENST00000233612 VPS72Q15906 364 aa27.26■■□□□ 1.95
GCA-201ENST00000233612 FNBP4Q8N3X1 1017 aaPredicted RBP27.26■■□□□ 1.95
GCA-201ENST00000233612 SPATA31A6Q5VVP1 1343 aa27.26■■□□□ 1.95
GCA-201ENST00000233612 USP42Q9H9J4 1324 aaKnown RBP27.26■■□□□ 1.95
GCA-201ENST00000233612 BCL9LQ86UU0 1499 aa27.25■■□□□ 1.95
GCA-201ENST00000233612 MARCH10Q8NA82 808 aaPredicted RBP27.25■■□□□ 1.95
GCA-201ENST00000233612 CCDC191Q8NCU4 936 aa27.25■■□□□ 1.95
GCA-201ENST00000233612 DAXXQ9UER7 740 aaPredicted RBP27.25■■□□□ 1.95
GCA-201ENST00000233612 TRIM28Q13263 835 aaKnown RBP27.24■■□□□ 1.95
GCA-201ENST00000233612 BECN1Q14457 450 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 SLC4A9Q96Q91 983 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 IL1RAPL2Q9NP60 686 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 A0A087WZG4 1122 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 ATP5J2-PTCD1G3V325 749 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 CASC1Q6TDU7 716 aa27.24■■□□□ 1.95
GCA-201ENST00000233612 RBM42Q9BTD8 480 aaKnown RBP27.24■■□□□ 1.95
GCA-201ENST00000233612 CYP19A1P11511 503 aaPredicted RBP27.23■■□□□ 1.95
GCA-201ENST00000233612 EPHA10Q5JZY3 1008 aa27.23■■□□□ 1.95
GCA-201ENST00000233612 ISCA1Q9BUE6 129 aa27.23■■□□□ 1.95
GCA-201ENST00000233612 CWC25Q9NXE8 425 aaPredicted RBP27.23■■□□□ 1.95
GCA-201ENST00000233612 COPRSQ9NQ92 184 aa27.22■■□□□ 1.95
GCA-201ENST00000233612 KAT6BQ8WYB5 2073 aa27.21■■□□□ 1.95
GCA-201ENST00000233612 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
GCA-201ENST00000233612 CLASRPQ8N2M8 674 aaKnown RBP27.21■■□□□ 1.95
GCA-201ENST00000233612 CERKQ8TCT0 537 aa27.21■■□□□ 1.95
GCA-201ENST00000233612 NGLY1Q96IV0 654 aa27.21■■□□□ 1.95
GCA-201ENST00000233612 BCL11AQ9H165 835 aa27.21■■□□□ 1.95
GCA-201ENST00000233612 TTC41PQ6P2S7 1318 aa27.2■■□□□ 1.95
GCA-201ENST00000233612 G3BP1Q13283 466 aaKnown RBP eCLIP27.2■■□□□ 1.94
GCA-201ENST00000233612 UBE3BQ7Z3V4 1068 aa27.2■■□□□ 1.94
GCA-201ENST00000233612 TJP1Q07157 1748 aa27.2■■□□□ 1.94
GCA-201ENST00000233612 CICQ96RK0 1608 aaPredicted RBP27.19■■□□□ 1.94
GCA-201ENST00000233612 RFX5P48382 616 aaPredicted RBP27.19■■□□□ 1.94
GCA-201ENST00000233612 OS9Q13438 667 aaPredicted RBP27.19■■□□□ 1.94
GCA-201ENST00000233612 PI4K2BQ8TCG2 481 aa27.19■■□□□ 1.94
GCA-201ENST00000233612 PA2G4Q9UQ80 394 aaKnown RBP27.19■■□□□ 1.94
GCA-201ENST00000233612 CCDC9Q9Y3X0 531 aaKnown RBP27.19■■□□□ 1.94
GCA-201ENST00000233612 NUTM1Q86Y26 1132 aa27.18■■□□□ 1.94
GCA-201ENST00000233612 SYTL4Q96C24 671 aaPredicted RBP27.18■■□□□ 1.94
GCA-201ENST00000233612 ZBTB3Q9H5J0 574 aa27.18■■□□□ 1.94
GCA-201ENST00000233612 SASH1O94885 1247 aa27.17■■□□□ 1.94
GCA-201ENST00000233612 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.17■■□□□ 1.94
GCA-201ENST00000233612 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
GCA-201ENST00000233612 SLC4A3P48751 1232 aa27.16■■□□□ 1.94
GCA-201ENST00000233612 FOXO4P98177 505 aa27.16■■□□□ 1.94
GCA-201ENST00000233612 KIF6Q6ZMV9 814 aa27.16■■□□□ 1.94
GCA-201ENST00000233612 C8orf37Q96NL8 207 aa27.16■■□□□ 1.94
GCA-201ENST00000233612 IL6STP40189 918 aaPredicted RBP27.15■■□□□ 1.94
GCA-201ENST00000233612 USP26Q9BXU7 913 aa27.15■■□□□ 1.94
GCA-201ENST00000233612 PTPN12Q05209 780 aaKnown RBP27.14■■□□□ 1.94
GCA-201ENST00000233612 TSHZ3Q63HK5 1081 aa27.14■■□□□ 1.94
GCA-201ENST00000233612 GIGYF2Q6Y7W6 1299 aaKnown RBP27.14■■□□□ 1.94
GCA-201ENST00000233612 KIF2CQ99661 725 aa27.14■■□□□ 1.94
GCA-201ENST00000233612 TBC1D2Q9BYX2 928 aa27.14■■□□□ 1.93
GCA-201ENST00000233612 ERC2O15083 957 aa27.13■■□□□ 1.93
GCA-201ENST00000233612 GLRX3O76003 335 aaKnown RBP27.13■■□□□ 1.93
GCA-201ENST00000233612 REC8O95072 547 aa27.13■■□□□ 1.93
GCA-201ENST00000233612 HSP90AB3PQ58FF7 597 aa27.13■■□□□ 1.93
GCA-201ENST00000233612 SNX21Q969T3 373 aa27.13■■□□□ 1.93
GCA-201ENST00000233612 ZNF831Q5JPB2 1677 aa27.12■■□□□ 1.93
GCA-201ENST00000233612 ERVV-1B6SEH8 477 aa27.11■■□□□ 1.93
GCA-201ENST00000233612 JARID2Q92833 1246 aaPredicted RBP27.11■■□□□ 1.93
GCA-201ENST00000233612 SMARCC1Q92922 1105 aaPredicted RBP27.11■■□□□ 1.93
GCA-201ENST00000233612 ECHDC1Q9NTX5 307 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms