RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 SPC24Q8NBT2 197 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 FLT4P35916 1363 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 CCDC83Q8IWF9 413 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 MAP3K5Q99683 1374 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 SBNO1A3KN83 1393 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
SCNN1A-201ENST00000228916 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 CPA1P15085 419 aa16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 KCNB2Q92953 911 aa16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 UBR1Q8IWV7 1749 aa16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 ST3GAL1Q11201 340 aa16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 TM6SF1Q9BZW5 370 aa16.69■□□□□ 0.26
SCNN1A-201ENST00000228916 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-201ENST00000228916 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
SCNN1A-201ENST00000228916 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SCNN1A-201ENST00000228916 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
SCNN1A-201ENST00000228916 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
SCNN1A-201ENST00000228916 ELP1O95163 1332 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 PTGS1P23219 599 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 SYCP1Q15431 976 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 MAP3K11Q16584 847 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 FEZ1Q99689 392 aa16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-201ENST00000228916 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 LTKP29376 864 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 AMPHP49418 695 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 TYRO3Q06418 890 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 TNRQ92752 1358 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
SCNN1A-201ENST00000228916 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 TTC41PQ6P2S7 1318 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 PTPRUQ92729 1446 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 KRT85P78386 507 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 PTH1RQ03431 593 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 ME3Q16798 604 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
SCNN1A-201ENST00000228916 LIG1P18858 919 aa16.64■□□□□ 0.25
SCNN1A-201ENST00000228916 LUZP1Q86V48 1076 aa16.64■□□□□ 0.25
SCNN1A-201ENST00000228916 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
SCNN1A-201ENST00000228916 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
SCNN1A-201ENST00000228916 PIK3C2AO00443 1686 aa16.64■□□□□ 0.25
SCNN1A-201ENST00000228916 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 DTNBO60941 627 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
SCNN1A-201ENST00000228916 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
SCNN1A-201ENST00000228916 OGFRQ9NZT2 677 aa16.62■□□□□ 0.25
SCNN1A-201ENST00000228916 LRMPQ12912 555 aa16.62■□□□□ 0.25
SCNN1A-201ENST00000228916 CAMK4Q16566 473 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 CDC37L1Q7L3B6 337 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 TPCN1Q9ULQ1 816 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 ADGRL3Q9HAR2 1447 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 ZNF75DP51815 510 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 TAF7Q15545 349 aaPredicted RBP16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
SCNN1A-201ENST00000228916 PDCP20941 246 aa16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 HOXC9P31274 260 aa16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 C16orf45Q96MC5 204 aaPredicted RBP16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms