RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
CTSC-201ENST00000227266 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.151e-7■■■■□ 22.7
CTSC-201ENST00000227266 ADCY9O60503 1353 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 COL15A1P39059 1388 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 DZIP3Q86Y13 1208 aaKnown RBP14.1□□□□□ -0.15
CTSC-201ENST00000227266 PLBD2Q8NHP8 589 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 DNAAF4Q8WXU2 420 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 ABCC4O15439 1325 aa14.1□□□□□ -0.15
CTSC-201ENST00000227266 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
CTSC-201ENST00000227266 COG6Q9Y2V7 657 aa14.09□□□□□ -0.15
CTSC-201ENST00000227266 COL5A3P25940 1745 aaPredicted RBP14.09□□□□□ -0.15
CTSC-201ENST00000227266 ZNF827Q17R98 1081 aa14.09□□□□□ -0.15
CTSC-201ENST00000227266 ITPRIPQ8IWB1 547 aa14.09□□□□□ -0.15
CTSC-201ENST00000227266 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
CTSC-201ENST00000227266 C4BP0C0L5 1744 aa14.08□□□□□ -0.15
CTSC-201ENST00000227266 A0A087WZG4 1122 aa14.08□□□□□ -0.16
CTSC-201ENST00000227266 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
CTSC-201ENST00000227266 MAP3K15Q6ZN16 1313 aa14.08□□□□□ -0.16
CTSC-201ENST00000227266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
CTSC-201ENST00000227266 TRAPPC3LQ5T215 181 aa14.07□□□□□ -0.16
CTSC-201ENST00000227266 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
CTSC-201ENST00000227266 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
CTSC-201ENST00000227266 MVPQ14764 893 aaKnown RBP14.07□□□□□ -0.16
CTSC-201ENST00000227266 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
CTSC-201ENST00000227266 MYD88Q99836 296 aa14.07□□□□□ -0.16
CTSC-201ENST00000227266 RFC4P35249 363 aa14.06□□□□□ -0.16
CTSC-201ENST00000227266 CCT4P50991 539 aaKnown RBP14.06□□□□□ -0.16
CTSC-201ENST00000227266 NEXNQ0ZGT2 675 aa14.06□□□□□ -0.16
CTSC-201ENST00000227266 HLFQ16534 295 aa14.06□□□□□ -0.16
CTSC-201ENST00000227266 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
CTSC-201ENST00000227266 METTL22Q9BUU2 404 aaPredicted RBP14.06□□□□□ -0.16
CTSC-201ENST00000227266 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
CTSC-201ENST00000227266 RREB1Q92766 1687 aa14.06□□□□□ -0.16
CTSC-201ENST00000227266 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 CAMTA2O94983 1202 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 SSFA2P28290 1259 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 SRCIN1Q9C0H9 1055 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 STK32BQ9NY57 414 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
CTSC-201ENST00000227266 RGPD4Q7Z3J3 1758 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 ERVV-1B6SEH8 477 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 MSH5O43196 834 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 ZPR1O75312 459 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 ADRA2BP18089 450 aa14.05□□□□□ -0.16
CTSC-201ENST00000227266 CWF19L2Q2TBE0 894 aaKnown RBP14.05□□□□□ -0.16
CTSC-201ENST00000227266 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
CTSC-201ENST00000227266 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
CTSC-201ENST00000227266 USPL1Q5W0Q7 1092 aa14.04□□□□□ -0.16
CTSC-201ENST00000227266 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
CTSC-201ENST00000227266 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
CTSC-201ENST00000227266 TSHZ2Q9NRE2 1034 aa14.04□□□□□ -0.16
CTSC-201ENST00000227266 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
CTSC-201ENST00000227266 IGKV5-2P06315 115 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 DDX19BQ9UMR2 479 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 GPTP24298 496 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 ZNF652Q9Y2D9 606 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
CTSC-201ENST00000227266 HSP90AB3PQ58FF7 597 aa14.02□□□□□ -0.16
CTSC-201ENST00000227266 USP42Q9H9J4 1324 aaKnown RBP14.02□□□□□ -0.16
CTSC-201ENST00000227266 ATP10DQ9P241 1426 aa14.02□□□□□ -0.16
CTSC-201ENST00000227266 NEURL1BA8MQ27 555 aa14.02□□□□□ -0.17
CTSC-201ENST00000227266 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
CTSC-201ENST00000227266 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
CTSC-201ENST00000227266 PNPLA7Q6ZV29 1317 aa14.01□□□□□ -0.17
CTSC-201ENST00000227266 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
CTSC-201ENST00000227266 MEIS3Q99687 375 aa14.01□□□□□ -0.17
CTSC-201ENST00000227266 BCL2L12Q9HB09 334 aa14.01□□□□□ -0.17
CTSC-201ENST00000227266 ZBTB7BO15156 539 aaPredicted RBP14□□□□□ -0.17
CTSC-201ENST00000227266 GCKRQ14397 625 aa14□□□□□ -0.17
CTSC-201ENST00000227266 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CTSC-201ENST00000227266 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
CTSC-201ENST00000227266 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
CTSC-201ENST00000227266 ISCA1Q9BUE6 129 aa14□□□□□ -0.17
CTSC-201ENST00000227266 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
CTSC-201ENST00000227266 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
CTSC-201ENST00000227266 NIP7Q9Y221 180 aaKnown RBP eCLIP14□□□□□ -0.17
CTSC-201ENST00000227266 USP44Q9H0E7 712 aa14□□□□□ -0.17
CTSC-201ENST00000227266 TBC1D9BQ66K14 1250 aa13.99□□□□□ -0.17
CTSC-201ENST00000227266 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
CTSC-201ENST00000227266 CCDC191Q8NCU4 936 aa13.99□□□□□ -0.17
CTSC-201ENST00000227266 JARID2Q92833 1246 aaPredicted RBP13.99□□□□□ -0.17
CTSC-201ENST00000227266 CHMP4BQ9H444 224 aaKnown RBP13.99□□□□□ -0.17
CTSC-201ENST00000227266 UBN2Q6ZU65 1347 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 ARFGEF2Q9Y6D5 1785 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 GRM8O00222 908 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 GYS1P13807 737 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
CTSC-201ENST00000227266 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
CTSC-201ENST00000227266 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 ZBTB40Q9NUA8 1239 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
CTSC-201ENST00000227266 UBR3Q6ZT12 1888 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms