RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 PDE4CQ08493 712 aa16.84■□□□□ 0.29
SHPK-201ENST00000225519 CACTINQ8WUQ7 758 aaKnown RBP16.84■□□□□ 0.29
SHPK-201ENST00000225519 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.29
SHPK-201ENST00000225519 PDCP20941 246 aa16.83■□□□□ 0.29
SHPK-201ENST00000225519 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.29
SHPK-201ENST00000225519 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
SHPK-201ENST00000225519 FOXO3O43524 673 aa16.83■□□□□ 0.28
SHPK-201ENST00000225519 LSG1Q9H089 658 aaKnown RBP16.83■□□□□ 0.28
SHPK-201ENST00000225519 DDX19AQ9NUU7 478 aaKnown RBP16.83■□□□□ 0.28
SHPK-201ENST00000225519 HYPKQ9NX55 129 aa16.83■□□□□ 0.28
SHPK-201ENST00000225519 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
SHPK-201ENST00000225519 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
SHPK-201ENST00000225519 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
SHPK-201ENST00000225519 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
SHPK-201ENST00000225519 PTPRMP28827 1452 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
SHPK-201ENST00000225519 TERF2Q15554 542 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
SHPK-201ENST00000225519 CDC37L1Q7L3B6 337 aa16.82■□□□□ 0.28
SHPK-201ENST00000225519 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
SHPK-201ENST00000225519 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
SHPK-201ENST00000225519 TRERF1Q96PN7 1200 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
SHPK-201ENST00000225519 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 AOX1Q06278 1338 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 STK3Q13188 491 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.81■□□□□ 0.28
SHPK-201ENST00000225519 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 SKILP12757 684 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 ELF2Q15723 593 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
SHPK-201ENST00000225519 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
SHPK-201ENST00000225519 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 ME3Q16798 604 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 ADCK5Q3MIX3 580 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 TMEM51Q9NW97 253 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
SHPK-201ENST00000225519 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
SHPK-201ENST00000225519 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
SHPK-201ENST00000225519 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
SHPK-201ENST00000225519 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 CALCOCO1Q9P1Z2 691 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 WASLO00401 505 aaPredicted RBP16.79■□□□□ 0.28
SHPK-201ENST00000225519 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 KIF20BQ96Q89 1820 aa16.79■□□□□ 0.28
SHPK-201ENST00000225519 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 H3BQV1 296 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 PTH1RQ03431 593 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 ARID5BQ14865 1188 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 PLA2G4DQ86XP0 818 aa16.78■□□□□ 0.28
SHPK-201ENST00000225519 TDRD7Q8NHU6 1098 aaKnown RBP16.78■□□□□ 0.28
SHPK-201ENST00000225519 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
SHPK-201ENST00000225519 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
SHPK-201ENST00000225519 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
SHPK-201ENST00000225519 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
SHPK-201ENST00000225519 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
SHPK-201ENST00000225519 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
SHPK-201ENST00000225519 USP27XA6NNY8 438 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 NR1I2O75469 434 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 FBXO38Q6PIJ6 1188 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 ERO1AQ96HE7 468 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 GPATCH3Q96I76 525 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 USP44Q9H0E7 712 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 DLG5Q8TDM6 1919 aa16.77■□□□□ 0.27
SHPK-201ENST00000225519 RIMBP3CA6NJZ7 1639 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 RIMBP3BA6NNM3 1639 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 ABCA9Q8IUA7 1624 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 RIMBP3Q9UFD9 1639 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 NEMFO60524 1076 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 SLU7O95391 586 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 ATP7BP35670 1465 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 ZRSR1Q15695 479 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 LRRC8AQ8IWT6 810 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 NOL10Q9BSC4 688 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 PSMA5P28066 241 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 FOSBP53539 338 aa16.76■□□□□ 0.27
SHPK-201ENST00000225519 MTHFSDQ2M296 383 aaKnown RBP16.76■□□□□ 0.27
SHPK-201ENST00000225519 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms