RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ARXQ96QS3 562 aa25.45■■□□□ 1.66
CCDC130-201ENST00000221554 HIP1O00291 1037 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 IFIT2P09913 472 aaKnown RBP25.44■■□□□ 1.66
CCDC130-201ENST00000221554 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 PANK2Q9BZ23 570 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 ZDHHC9Q9Y397 364 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 NPHP3Q7Z494 1330 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 PLEKHG5O94827 1062 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 BRD1O95696 1058 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 NEXNQ0ZGT2 675 aa25.44■■□□□ 1.66
CCDC130-201ENST00000221554 ANP32BQ92688 251 aaKnown RBP25.44■■□□□ 1.66
CCDC130-201ENST00000221554 IFNL2Q8IZJ0 200 aa25.43■■□□□ 1.66
CCDC130-201ENST00000221554 TOM1O60784 492 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 PKP1Q13835 747 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 PROSER3Q2NL68 480 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 GAS2L3Q86XJ1 694 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 EVI5LQ96CN4 794 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 LSG1Q9H089 658 aaKnown RBP25.42■■□□□ 1.66
CCDC130-201ENST00000221554 DIAPH3Q9NSV4 1193 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 SCN11AQ9UI33 1791 aa25.42■■□□□ 1.66
CCDC130-201ENST00000221554 MBD3O95983 291 aa25.41■■□□□ 1.66
CCDC130-201ENST00000221554 G3BP1Q13283 466 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCDC130-201ENST00000221554 PHKG2P15735 406 aa25.41■■□□□ 1.66
CCDC130-201ENST00000221554 PIP4K2BP78356 416 aa25.41■■□□□ 1.66
CCDC130-201ENST00000221554 NLRP2Q9NX02 1062 aa25.41■■□□□ 1.66
CCDC130-201ENST00000221554 PDIA6Q15084 440 aa25.4■■□□□ 1.66
CCDC130-201ENST00000221554 RIC3Q7Z5B4 369 aa25.4■■□□□ 1.66
CCDC130-201ENST00000221554 RGPD5Q99666 1765 aa25.4■■□□□ 1.66
CCDC130-201ENST00000221554 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
CCDC130-201ENST00000221554 PRPF40AO75400 957 aaKnown RBP25.39■■□□□ 1.65
CCDC130-201ENST00000221554 CWF19L2Q2TBE0 894 aaKnown RBP25.39■■□□□ 1.65
CCDC130-201ENST00000221554 DCAF5Q96JK2 942 aa25.39■■□□□ 1.65
CCDC130-201ENST00000221554 SNX14Q9Y5W7 946 aa25.39■■□□□ 1.65
CCDC130-201ENST00000221554 WDR33Q9C0J8 1336 aaKnown RBP25.38■■□□□ 1.65
CCDC130-201ENST00000221554 CCDC173Q0VFZ6 552 aa25.38■■□□□ 1.65
CCDC130-201ENST00000221554 MAP4K4O95819 1239 aaPredicted RBP25.37■■□□□ 1.65
CCDC130-201ENST00000221554 NCLP19338 710 aaKnown RBP25.37■■□□□ 1.65
CCDC130-201ENST00000221554 BRINP3Q76B58 766 aa25.37■■□□□ 1.65
CCDC130-201ENST00000221554 TRIM44Q96DX7 344 aaPredicted RBP25.37■■□□□ 1.65
CCDC130-201ENST00000221554 SUCLG2Q96I99 432 aa25.36■■□□□ 1.65
CCDC130-201ENST00000221554 TM6SF1Q9BZW5 370 aa25.36■■□□□ 1.65
CCDC130-201ENST00000221554 KDM6AO15550 1401 aaPredicted RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 MRC1P22897 1456 aa25.36■■□□□ 1.65
CCDC130-201ENST00000221554 SNRPA1P09661 255 aaKnown RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 ZSCAN23Q3MJ62 389 aa25.36■■□□□ 1.65
CCDC130-201ENST00000221554 CAVIN1Q6NZI2 390 aaKnown RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 CWC27Q6UX04 472 aaKnown RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 KCNB2Q92953 911 aa25.36■■□□□ 1.65
CCDC130-201ENST00000221554 METTL22Q9BUU2 404 aaPredicted RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 UPF3BQ9BZI7 483 aaKnown RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.36■■□□□ 1.65
CCDC130-201ENST00000221554 PRAMEF22A3QJZ6 481 aa25.35■■□□□ 1.65
CCDC130-201ENST00000221554 NASPP49321 788 aaPredicted RBP25.35■■□□□ 1.65
CCDC130-201ENST00000221554 AACSQ86V21 672 aa25.35■■□□□ 1.65
CCDC130-201ENST00000221554 TTC5Q8N0Z6 440 aa25.35■■□□□ 1.65
CCDC130-201ENST00000221554 IL25Q9H293 177 aa25.35■■□□□ 1.65
CCDC130-201ENST00000221554 LIMCH1Q9UPQ0 1083 aa25.35■■□□□ 1.65
CCDC130-201ENST00000221554 COL18A1P39060 1754 aa25.34■■□□□ 1.65
CCDC130-201ENST00000221554 COL15A1P39059 1388 aa25.34■■□□□ 1.65
CCDC130-201ENST00000221554 TTC14Q96N46 770 aa25.34■■□□□ 1.65
CCDC130-201ENST00000221554 BICC1Q9H694 974 aaKnown RBP25.34■■□□□ 1.65
CCDC130-201ENST00000221554 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
CCDC130-201ENST00000221554 NEURL1BA8MQ27 555 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 CSB-PGBD3P0DP91 1061 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 AIMP1Q12904 312 aaKnown RBP25.33■■□□□ 1.65
CCDC130-201ENST00000221554 NFATC2IPQ8NCF5 419 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 DDX17Q92841 729 aaKnown RBP25.33■■□□□ 1.65
CCDC130-201ENST00000221554 PPP1R9BQ96SB3 815 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 TNS3Q68CZ2 1445 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 PDIA4P13667 645 aaKnown RBP25.33■■□□□ 1.65
CCDC130-201ENST00000221554 CLCN1P35523 988 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 GCKRQ14397 625 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 KAZALD1Q96I82 304 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 ZSCAN31Q96LW9 406 aaPredicted RBP25.33■■□□□ 1.65
CCDC130-201ENST00000221554 FMNL2Q96PY5 1086 aa25.33■■□□□ 1.65
CCDC130-201ENST00000221554 IGKV5-2P06315 115 aa25.32■■□□□ 1.64
CCDC130-201ENST00000221554 SYAP1Q96A49 352 aaPredicted RBP25.32■■□□□ 1.64
CCDC130-201ENST00000221554 RRAGDQ9NQL2 400 aaPredicted RBP25.32■■□□□ 1.64
CCDC130-201ENST00000221554 CPDO75976 1380 aa25.32■■□□□ 1.64
CCDC130-201ENST00000221554 ANKRD13DQ6ZTN6 518 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 SNRKQ9NRH2 765 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 PA2G4Q9UQ80 394 aaKnown RBP25.31■■□□□ 1.64
CCDC130-201ENST00000221554 SASH1O94885 1247 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 VPS53Q5VIR6 699 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 GPT2Q8TD30 523 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 XAGE3Q8WTP9 111 aa25.31■■□□□ 1.64
CCDC130-201ENST00000221554 ZKSCAN1P17029 563 aaPredicted RBP25.3■■□□□ 1.64
CCDC130-201ENST00000221554 SLC39A6Q13433 755 aa25.3■■□□□ 1.64
CCDC130-201ENST00000221554 COPS6Q7L5N1 327 aa25.3■■□□□ 1.64
CCDC130-201ENST00000221554 SH2B1Q9NRF2 756 aaPredicted RBP25.3■■□□□ 1.64
CCDC130-201ENST00000221554 ERBB4Q15303 1308 aa25.29■■□□□ 1.64
CCDC130-201ENST00000221554 MEGF6O75095 1541 aa25.29■■□□□ 1.64
CCDC130-201ENST00000221554 PHLPP1O60346 1717 aa25.29■■□□□ 1.64
CCDC130-201ENST00000221554 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
CCDC130-201ENST00000221554 KLHL34Q8N239 644 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
CCDC130-201ENST00000221554 ATP6V1DQ9Y5K8 247 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 C5P01031 1676 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 AK2P54819 239 aa25.28■■□□□ 1.64
CCDC130-201ENST00000221554 NOL8Q76FK4 1167 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms