RNA–Protein interactions for RNA: ENST00000220772.7

SFRP1-201, Transcript of secreted frizzled related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFRP1, Length 4,492 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP1-201ENST00000220772 ZBTB3Q9H5J0 574 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 LRP2BPQ9P2M1 347 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
SFRP1-201ENST00000220772 FLT4P35916 1363 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 ZNF165P49910 485 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 UVSSAQ2YD98 709 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 CFAP100Q494V2 611 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 PDCL2Q8N4E4 241 aa19.31■□□□□ 0.68
SFRP1-201ENST00000220772 MAP3K19Q56UN5 1328 aa19.3■□□□□ 0.68
SFRP1-201ENST00000220772 PIP4K2AP48426 406 aaPredicted RBP19.3■□□□□ 0.68
SFRP1-201ENST00000220772 CHMLP26374 656 aa19.3■□□□□ 0.68
SFRP1-201ENST00000220772 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
SFRP1-201ENST00000220772 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
SFRP1-201ENST00000220772 IFIT5Q13325 482 aaKnown RBP19.29■□□□□ 0.68
SFRP1-201ENST00000220772 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 PPFIA3O75145 1194 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 ALDH1L1O75891 902 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 KRT28Q7Z3Y7 464 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 HMG20BQ9P0W2 317 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 GRM8O00222 908 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 CTAGE5O15320 804 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 FSIP1Q8NA03 581 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
SFRP1-201ENST00000220772 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
SFRP1-201ENST00000220772 KSR2Q6VAB6 950 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
SFRP1-201ENST00000220772 CHL1O00533 1208 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 OFD1O75665 1012 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 BRF1Q92994 677 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 KDM5CP41229 1560 aa19.28■□□□□ 0.68
SFRP1-201ENST00000220772 ZNF213O14771 459 aa19.27■□□□□ 0.68
SFRP1-201ENST00000220772 NOL7Q9UMY1 257 aaKnown RBP19.27■□□□□ 0.68
SFRP1-201ENST00000220772 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
SFRP1-201ENST00000220772 WASF1Q92558 559 aa19.27■□□□□ 0.68
SFRP1-201ENST00000220772 MAGEC2Q9UBF1 373 aaPredicted RBP19.27■□□□□ 0.68
SFRP1-201ENST00000220772 CAGE1Q8TC20 777 aa19.27■□□□□ 0.68
SFRP1-201ENST00000220772 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
SFRP1-201ENST00000220772 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.67
SFRP1-201ENST00000220772 SLC39A6Q13433 755 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
SFRP1-201ENST00000220772 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 MSH6P52701 1360 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 LINS1Q8NG48 757 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 INTS4Q96HW7 963 aaKnown RBP19.26■□□□□ 0.67
SFRP1-201ENST00000220772 NAPBQ9H115 298 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
SFRP1-201ENST00000220772 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
SFRP1-201ENST00000220772 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
SFRP1-201ENST00000220772 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 C16orf45Q96MC5 204 aaPredicted RBP19.25■□□□□ 0.67
SFRP1-201ENST00000220772 ZNF830Q96NB3 372 aaPredicted RBP19.25■□□□□ 0.67
SFRP1-201ENST00000220772 RUFY1Q96T51 708 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 F13A1P00488 732 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 AK2P54819 239 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 HAND2P61296 217 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
SFRP1-201ENST00000220772 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
SFRP1-201ENST00000220772 TNNT1P13805 278 aa19.24■□□□□ 0.67
SFRP1-201ENST00000220772 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
SFRP1-201ENST00000220772 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
SFRP1-201ENST00000220772 ZKSCAN5Q9Y2L8 839 aa19.24■□□□□ 0.67
SFRP1-201ENST00000220772 IGHMBP2P38935 993 aaKnown RBP19.24■□□□□ 0.67
SFRP1-201ENST00000220772 LRRC59Q96AG4 307 aaKnown RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 ORC3Q9UBD5 711 aaPredicted RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 UBXN4Q92575 508 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 KIF2AO00139 706 aaPredicted RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 KIF18AQ8NI77 898 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 MINDY4BA8MYZ0 360 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 CDK5RAP3Q96JB5 506 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 ZNHIT6Q9NWK9 470 aaKnown RBP19.23■□□□□ 0.67
SFRP1-201ENST00000220772 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
SFRP1-201ENST00000220772 TTC41PQ6P2S7 1318 aa19.22■□□□□ 0.67
SFRP1-201ENST00000220772 BIN1O00499 593 aa19.22■□□□□ 0.67
SFRP1-201ENST00000220772 CHRNA2Q15822 529 aa19.22■□□□□ 0.67
SFRP1-201ENST00000220772 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
SFRP1-201ENST00000220772 TRMT1Q9NXH9 659 aaKnown RBP19.22■□□□□ 0.67
SFRP1-201ENST00000220772 PIBF1Q8WXW3 757 aa19.22■□□□□ 0.67
SFRP1-201ENST00000220772 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
SFRP1-201ENST00000220772 LDHAL6AQ6ZMR3 332 aa19.22■□□□□ 0.67
SFRP1-201ENST00000220772 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
SFRP1-201ENST00000220772 ZSCAN16Q9H4T2 348 aaPredicted RBP19.22■□□□□ 0.67
SFRP1-201ENST00000220772 CCDC66A2RUB6 948 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
SFRP1-201ENST00000220772 GPTP24298 496 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 STIM1Q13586 685 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 AK7Q96M32 723 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 DACT1Q9NYF0 836 aa19.21■□□□□ 0.67
SFRP1-201ENST00000220772 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
SFRP1-201ENST00000220772 EPS15P42566 896 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms