RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CUL5Q93034 780 aa26.95■■□□□ 1.91
TARBP1-201ENST00000040877 EHMT1Q9H9B1 1298 aa26.95■■□□□ 1.91
TARBP1-201ENST00000040877 TRAPPC8Q9Y2L5 1435 aa26.95■■□□□ 1.91
TARBP1-201ENST00000040877 ADAMTS12P58397 1594 aa26.95■■□□□ 1.9
TARBP1-201ENST00000040877 ATP5J2-PTCD1G3V325 749 aa26.95■■□□□ 1.9
TARBP1-201ENST00000040877 ERLIN1O75477 346 aa26.95■■□□□ 1.9
TARBP1-201ENST00000040877 KIF5BP33176 963 aa26.95■■□□□ 1.9
TARBP1-201ENST00000040877 ZNF397Q8NF99 534 aaPredicted RBP26.95■■□□□ 1.9
TARBP1-201ENST00000040877 ZFYP08048 801 aaPredicted RBP26.95■■□□□ 1.9
TARBP1-201ENST00000040877 C6orf229H3BNL8 230 aa26.94■■□□□ 1.9
TARBP1-201ENST00000040877 KIF20AO95235 890 aa26.94■■□□□ 1.9
TARBP1-201ENST00000040877 RRP9O43818 475 aaKnown RBP26.94■■□□□ 1.9
TARBP1-201ENST00000040877 CCDC194A0A1B0GVG4 234 aa26.94■■□□□ 1.9
TARBP1-201ENST00000040877 TOM1O60784 492 aa26.94■■□□□ 1.9
TARBP1-201ENST00000040877 PDE4BQ07343 736 aa26.94■■□□□ 1.9
TARBP1-201ENST00000040877 PAF1Q8N7H5 531 aa26.93■■□□□ 1.9
TARBP1-201ENST00000040877 EPB41L2O43491 1005 aaKnown RBP26.93■■□□□ 1.9
TARBP1-201ENST00000040877 RHPN1Q8TCX5 695 aa26.93■■□□□ 1.9
TARBP1-201ENST00000040877 CCDC96Q2M329 555 aa26.93■■□□□ 1.9
TARBP1-201ENST00000040877 CFAP100Q494V2 611 aa26.93■■□□□ 1.9
TARBP1-201ENST00000040877 TBC1D9Q6ZT07 1266 aa26.93■■□□□ 1.9
TARBP1-201ENST00000040877 CWC15Q9P013 229 aaKnown RBP26.93■■□□□ 1.9
TARBP1-201ENST00000040877 RFC4P35249 363 aa26.92■■□□□ 1.9
TARBP1-201ENST00000040877 ZFYVE9O95405 1425 aa26.92■■□□□ 1.9
TARBP1-201ENST00000040877 CCDC66A2RUB6 948 aa26.92■■□□□ 1.9
TARBP1-201ENST00000040877 FGFR1OPO95684 399 aaKnown RBP26.92■■□□□ 1.9
TARBP1-201ENST00000040877 FILIP1Q7Z7B0 1213 aa26.92■■□□□ 1.9
TARBP1-201ENST00000040877 TSG101Q99816 390 aa26.92■■□□□ 1.9
TARBP1-201ENST00000040877 PARD3Q8TEW0 1356 aa26.91■■□□□ 1.9
TARBP1-201ENST00000040877 PATL2C9JE40 543 aaKnown RBP26.91■■□□□ 1.9
TARBP1-201ENST00000040877 KIF2AO00139 706 aaPredicted RBP26.91■■□□□ 1.9
TARBP1-201ENST00000040877 GOLGA6L10A6NI86 522 aa26.91■■□□□ 1.9
TARBP1-201ENST00000040877 GSTO1P78417 241 aa26.91■■□□□ 1.9
TARBP1-201ENST00000040877 TRIM21P19474 475 aaKnown RBP26.91■■□□□ 1.9
TARBP1-201ENST00000040877 NCOA7Q8NI08 942 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 PYM1Q9BRP8 204 aaKnown RBP26.9■■□□□ 1.9
TARBP1-201ENST00000040877 DNAI2Q9GZS0 605 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 TRPM2O94759 1503 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 NPATQ14207 1427 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 KSR2Q6VAB6 950 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 SYCE3A1L190 88 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 POTEJP0CG39 1038 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 C19orf44Q9H6X5 657 aa26.9■■□□□ 1.9
TARBP1-201ENST00000040877 DDX19AQ9NUU7 478 aaKnown RBP26.9■■□□□ 1.9
TARBP1-201ENST00000040877 NLRP5P59047 1200 aa26.89■■□□□ 1.9
TARBP1-201ENST00000040877 ST5P78524 1137 aa26.89■■□□□ 1.9
TARBP1-201ENST00000040877 EIF4A2Q14240 407 aaKnown RBP26.89■■□□□ 1.9
TARBP1-201ENST00000040877 SOS1Q07889 1333 aaPredicted RBP26.89■■□□□ 1.9
TARBP1-201ENST00000040877 BCL11BQ9C0K0 894 aaPredicted RBP26.89■■□□□ 1.9
TARBP1-201ENST00000040877 CHPF2Q9P2E5 772 aa26.89■■□□□ 1.9
TARBP1-201ENST00000040877 IARSP41252 1262 aaKnown RBP26.89■■□□□ 1.89
TARBP1-201ENST00000040877 NEK1Q96PY6 1258 aa26.89■■□□□ 1.89
TARBP1-201ENST00000040877 WDR62O43379 1518 aa26.89■■□□□ 1.89
TARBP1-201ENST00000040877 NUCB1Q02818 461 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 ARHGEF12Q9NZN5 1544 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 FKBP15Q5T1M5 1219 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 PPP4R3AQ6IN85 833 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 MFSD6Q6ZSS7 791 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 ESPNB1AK53 854 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 ANKRD44Q8N8A2 993 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 HLA-DOAP06340 250 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 ARHGAP29Q52LW3 1261 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 NBPF6Q5VWK0 638 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 NBPF5PQ86XG9 351 aaPredicted RBP26.88■■□□□ 1.89
TARBP1-201ENST00000040877 XAGE3Q8WTP9 111 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 NBPF4Q96M43 638 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 POLKQ9UBT6 870 aa26.88■■□□□ 1.89
TARBP1-201ENST00000040877 MATR3P43243 847 aaKnown RBP eCLIP26.87■■□□□ 1.892e-6■■■□□ 18.8
TARBP1-201ENST00000040877 TMEM67Q5HYA8 995 aa26.87■■□□□ 1.89
TARBP1-201ENST00000040877 CCDC178Q5BJE1 867 aa26.87■■□□□ 1.89
TARBP1-201ENST00000040877 AXDND1Q5T1B0 1012 aaPredicted RBP26.87■■□□□ 1.89
TARBP1-201ENST00000040877 ZGPATQ8N5A5 531 aaKnown RBP26.87■■□□□ 1.89
TARBP1-201ENST00000040877 CRNKL1Q9BZJ0 848 aaKnown RBP26.87■■□□□ 1.89
TARBP1-201ENST00000040877 GRM8O00222 908 aa26.86■■□□□ 1.89
TARBP1-201ENST00000040877 SFPQP23246 707 aaKnown RBP eCLIP26.86■■□□□ 1.89
TARBP1-201ENST00000040877 TBC1D2Q9BYX2 928 aa26.86■■□□□ 1.89
TARBP1-201ENST00000040877 TAF4BQ92750 862 aa26.86■■□□□ 1.89
TARBP1-201ENST00000040877 USP16Q9Y5T5 823 aa26.86■■□□□ 1.89
TARBP1-201ENST00000040877 SEPT11Q9NVA2 429 aaKnown RBP26.86■■□□□ 1.89
TARBP1-201ENST00000040877 IL15P40933 162 aaPredicted RBP26.86■■□□□ 1.89
TARBP1-201ENST00000040877 BAG4O95429 457 aaKnown RBP26.85■■□□□ 1.89
TARBP1-201ENST00000040877 PPP4R3BQ5MIZ7 849 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 COPS6Q7L5N1 327 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 KIAA1328Q86T90 577 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 MAPKBP1O60336 1514 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 EIF3JO75822 258 aaKnown RBP26.85■■□□□ 1.89
TARBP1-201ENST00000040877 CAMK4Q16566 473 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 CABP5Q9NP86 173 aa26.85■■□□□ 1.89
TARBP1-201ENST00000040877 ANKRD18AQ8IVF6 992 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 ATP8B2P98198 1209 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 MRPL50Q8N5N7 158 aaKnown RBP26.84■■□□□ 1.89
TARBP1-201ENST00000040877 SNRKQ9NRH2 765 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 ABCC1P33527 1531 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 TSPY2A6NKD2 308 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 KAT14Q9H8E8 782 aa26.84■■□□□ 1.89
TARBP1-201ENST00000040877 ZSCAN12O43309 604 aa26.83■■□□□ 1.89
TARBP1-201ENST00000040877 MCM5P33992 734 aa26.83■■□□□ 1.89
TARBP1-201ENST00000040877 LINS1Q8NG48 757 aa26.83■■□□□ 1.89
TARBP1-201ENST00000040877 MEIS3Q99687 375 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms