RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.07
SYPL1-201ENST00000011473 MMP10P09238 476 aa15.51■□□□□ 0.07
SYPL1-201ENST00000011473 HLFQ16534 295 aa15.51■□□□□ 0.07
SYPL1-201ENST00000011473 NLGN1Q8N2Q7 840 aa15.5■□□□□ 0.07
SYPL1-201ENST00000011473 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 TBC1D9BQ66K14 1250 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 POLD1P28340 1107 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 NFIXQ14938 502 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 KIF6Q6ZMV9 814 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
SYPL1-201ENST00000011473 MAP3K15Q6ZN16 1313 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 DDR1Q08345 913 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 G2E3Q7L622 706 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 BCL2L13Q9BXK5 485 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
SYPL1-201ENST00000011473 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
SYPL1-201ENST00000011473 SCN7AQ01118 1682 aa15.46■□□□□ 0.07
SYPL1-201ENST00000011473 GPTP24298 496 aa15.46■□□□□ 0.06
SYPL1-201ENST00000011473 TM4SF1P30408 202 aa15.46■□□□□ 0.06
SYPL1-201ENST00000011473 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
SYPL1-201ENST00000011473 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
SYPL1-201ENST00000011473 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
SYPL1-201ENST00000011473 ZNF652Q9Y2D9 606 aa15.45■□□□□ 0.06
SYPL1-201ENST00000011473 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 SSH1Q8WYL5 1049 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 NIP7Q9Y221 180 aaKnown RBP eCLIP15.44■□□□□ 0.06
SYPL1-201ENST00000011473 PARP3Q9Y6F1 533 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 FLIIQ13045 1269 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
SYPL1-201ENST00000011473 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SYPL1-201ENST00000011473 FHDC1Q9C0D6 1143 aaPredicted RBP15.44■□□□□ 0.06
SYPL1-201ENST00000011473 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 BCORQ6W2J9 1755 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 LRP5O75197 1615 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
SYPL1-201ENST00000011473 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
SYPL1-201ENST00000011473 SERPINB2P05120 415 aa15.42■□□□□ 0.06
SYPL1-201ENST00000011473 FKBP5Q13451 457 aaPredicted RBP15.42■□□□□ 0.06
SYPL1-201ENST00000011473 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
SYPL1-201ENST00000011473 ATP5J2-PTCD1G3V325 749 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 COL24A1Q17RW2 1714 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
SYPL1-201ENST00000011473 MAP3K2Q9Y2U5 619 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 ADCY9O60503 1353 aa15.41■□□□□ 0.06
SYPL1-201ENST00000011473 F6X3S4 739 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 NPHP1O15259 732 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
SYPL1-201ENST00000011473 RARSP54136 660 aaKnown RBP15.4■□□□□ 0.06
SYPL1-201ENST00000011473 NBPF5PQ86XG9 351 aaPredicted RBP15.4■□□□□ 0.06
SYPL1-201ENST00000011473 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 MYD88Q99836 296 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
SYPL1-201ENST00000011473 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
SYPL1-201ENST00000011473 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
SYPL1-201ENST00000011473 SUSD4Q5VX71 490 aa15.39■□□□□ 0.05
SYPL1-201ENST00000011473 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
SYPL1-201ENST00000011473 SYT17Q9BSW7 474 aa15.39■□□□□ 0.05
SYPL1-201ENST00000011473 BCAR3O75815 825 aa15.38■□□□□ 0.05
SYPL1-201ENST00000011473 CT47B1P0C2W7 299 aaPredicted RBP15.38■□□□□ 0.05
SYPL1-201ENST00000011473 PRR5LQ6MZQ0 368 aa15.38■□□□□ 0.05
SYPL1-201ENST00000011473 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
SYPL1-201ENST00000011473 CNBD1Q8NA66 436 aa15.38■□□□□ 0.05
SYPL1-201ENST00000011473 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
SYPL1-201ENST00000011473 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
SYPL1-201ENST00000011473 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
SYPL1-201ENST00000011473 RGL2O15211 777 aa15.37■□□□□ 0.05
SYPL1-201ENST00000011473 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
SYPL1-201ENST00000011473 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
SYPL1-201ENST00000011473 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
SYPL1-201ENST00000011473 NUP98P52948 1817 aa15.36■□□□□ 0.05
SYPL1-201ENST00000011473 GTF2E1P29083 439 aaPredicted RBP15.36■□□□□ 0.05
SYPL1-201ENST00000011473 CWF19L2Q2TBE0 894 aaKnown RBP15.36■□□□□ 0.05
SYPL1-201ENST00000011473 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
SYPL1-201ENST00000011473 C10orf71Q711Q0 1435 aa15.36■□□□□ 0.05
SYPL1-201ENST00000011473 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 ERFEQ4G0M1 354 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 TPTE2Q6XPS3 522 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 NOB1Q9ULX3 412 aaKnown RBP15.35■□□□□ 0.05
SYPL1-201ENST00000011473 ARFGEF2Q9Y6D5 1785 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 NTSR2O95665 410 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
SYPL1-201ENST00000011473 CD2APQ9Y5K6 639 aa15.35■□□□□ 0.05
SYPL1-201ENST00000011473 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 CHRNA5P30532 468 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 PARP10Q53GL7 1025 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 ST5P78524 1137 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
SYPL1-201ENST00000011473 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms