RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Dbndd1Q9CZ00 160 aa27.83■■■□□ 2.05
Pcf11-204ENSMUST00000208058 Col24a1Q30D77 1733 aa27.83■■■□□ 2.05
Pcf11-204ENSMUST00000208058 Gnai1B2RSH2 354 aa27.82■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Unc5clQ6R653 518 aa27.82■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Gimap8Q75N62 688 aa27.82■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Gnai3Q9DC51 354 aa27.82■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Gjd4Q8BSD4 364 aa27.81■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Spire2Q8K1S6 718 aa27.81■■■□□ 2.04
Pcf11-204ENSMUST00000208058 UtrnE9Q6R7 3430 aa27.81■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Cdc37l1Q9CZP7 335 aa27.8■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Ncbp3Q8BZR9 615 aaKnown RBP27.79■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Fhdc1Q3ULZ2 1149 aa27.78■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Mrs2Q5NCE8 434 aa27.78■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Zfp646Q6NV66 1788 aa27.78■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Fkbp1aP26883 108 aaKnown RBP27.77■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Usp16Q99LG0 825 aa27.77■■■□□ 2.04
Pcf11-204ENSMUST00000208058 Olfr247E9PVJ7 320 aa27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Olfr819K7N727 320 aa27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Hspa2P17156 633 aa27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Ankle2Q6P1H6 964 aa27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Ptcd1Q8C2E4 695 aaKnown RBP27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Atxn3Q9CVD2 355 aa27.76■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Strip1Q8C079 837 aa27.75■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Gtpbp6Q3U6U5 514 aa27.74■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Susd4Q8BH32 490 aa27.74■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Arap2Q8BZ05 1703 aa27.74■■■□□ 2.03
Pcf11-204ENSMUST00000208058 CfhP06909 1234 aa27.73■■■□□ 2.03
Pcf11-204ENSMUST00000208058 XpcP51612 930 aa27.72■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Cct4P80315 539 aaKnown RBP27.71■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Foxo3Q9WVH4 672 aa27.71■■■□□ 2.03
Pcf11-204ENSMUST00000208058 Rbm5Q91YE7 815 aaKnown RBP27.7■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Nup188Q6ZQH8 1759 aa27.7■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ank1Q02357 1862 aa27.7■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Thrap3Q569Z6 951 aaKnown RBP27.69■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Soga3Q6NZL0 945 aa27.69■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Zbtb40Q6PCS8 1258 aa27.69■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Atxn2lQ7TQH0 1049 aaKnown RBP27.69■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ankrd50F7BE84 1390 aa27.69■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Atp2b4Q6Q477 1205 aa27.68■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ptf1aQ9QX98 324 aa27.68■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Aknad1E9Q8N6 675 aa27.67■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Atp6v0a2P15920 856 aa27.67■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Dpf2Q61103 391 aaKnown RBP27.67■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ankib1Q6ZPS6 1085 aa27.67■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Flt4P35917 1363 aa27.67■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Cnksr1A2A9K7 700 aa27.66■■■□□ 2.02
Pcf11-204ENSMUST00000208058 NpcdF8VQB8 469 aa27.66■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Hsp90ab1P11499 724 aaKnown RBP27.66■■■□□ 2.02
Pcf11-204ENSMUST00000208058 CrbnQ8C7D2 445 aa27.66■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ttc21aQ8C0S4 1314 aa27.66■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Mex3cQ05A36 652 aaKnown RBP27.65■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ttc5Q99LG4 440 aa27.65■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Setdb1O88974 1307 aa27.65■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Ltb4r2Q9JJL9 360 aa27.64■■■□□ 2.02
Pcf11-204ENSMUST00000208058 Btaf1E9QAE3 1848 aa27.64■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Stk32bQ9JJX8 414 aa27.63■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Myh1Q5SX40 1942 aa27.63■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Dok7Q18PE0 504 aa27.62■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Sh3tc1G3X9F6 1346 aa27.62■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Rbm25B2RY56 838 aaKnown RBP27.61■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Flt1P35969 1333 aa27.61■■■□□ 2.01
Pcf11-204ENSMUST00000208058 CoilQ5SU73 570 aa27.6■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Disp3A3KFU9 1347 aa27.6■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Irf9Q61179 399 aa27.59■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Neurod2Q62414 383 aa27.59■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Slc4a2P13808 1237 aaKnown RBP27.58■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Eva1cP58659 440 aa27.58■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Insm1Q63ZV0 521 aa27.58■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Speer4f1Q9D5Q6 258 aa27.58■■■□□ 2.01
Pcf11-204ENSMUST00000208058 Scn9aQ62205 1984 aa27.57■■■□□ 2
Pcf11-204ENSMUST00000208058 AK157302I3ITR1 129 aa27.57■■■□□ 2
Pcf11-204ENSMUST00000208058 Csf1rP09581 977 aa27.57■■■□□ 2
Pcf11-204ENSMUST00000208058 Isca1Q9D924 129 aa27.57■■■□□ 2
Pcf11-204ENSMUST00000208058 Psd3Q2PFD7 1037 aa27.56■■■□□ 2
Pcf11-204ENSMUST00000208058 Map3k9Q3U1V8 1077 aa27.56■■■□□ 2
Pcf11-204ENSMUST00000208058 Rbm17Q8JZX4 405 aaKnown RBP27.56■■■□□ 2
Pcf11-204ENSMUST00000208058 Bicc1Q99MQ1 977 aaKnown RBP27.56■■■□□ 2
Pcf11-204ENSMUST00000208058 MypnQ5DTJ9 1315 aa27.56■■■□□ 2
Pcf11-204ENSMUST00000208058 AbraQ8BUZ1 375 aa27.55■■■□□ 2
Pcf11-204ENSMUST00000208058 Znf428Q8C1M2 176 aa27.55■■■□□ 2
Pcf11-204ENSMUST00000208058 Ttc41Q692V3 1318 aa27.55■■■□□ 2
Pcf11-204ENSMUST00000208058 Znf609Q8BZ47 1413 aa27.55■■■□□ 2
Pcf11-204ENSMUST00000208058 Ralbp1Q62172 648 aa27.54■■■□□ 2
Pcf11-204ENSMUST00000208058 Rasgrp4Q8BTM9 673 aa27.54■■■□□ 2
Pcf11-204ENSMUST00000208058 Upf1Q9EPU0 1124 aaKnown RBP27.54■■■□□ 2
Pcf11-204ENSMUST00000208058 PgfP49764 158 aa27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 Pcsk7Q61139 770 aa27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 Vil1Q62468 827 aa27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 Mak16Q8BGS0 296 aaKnown RBP27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 WaslQ91YD9 501 aa27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 Greb1lB9EJV3 1913 aa27.53■■■□□ 2
Pcf11-204ENSMUST00000208058 Mical3Q8CJ19 1993 aa27.52■■■□□ 2
Pcf11-204ENSMUST00000208058 Cyp2d11P24457 504 aa27.52■■■□□ 2
Pcf11-204ENSMUST00000208058 Fam83gQ5SWY7 812 aa27.52■■■□□ 2
Pcf11-204ENSMUST00000208058 Foxo4Q9WVH3 505 aa27.52■■■□□ 2
Pcf11-204ENSMUST00000208058 Ltn1Q6A009 1767 aa27.51■■□□□ 1.99
Pcf11-204ENSMUST00000208058 Cyp19a1P28649 503 aa27.51■■□□□ 1.99
Pcf11-204ENSMUST00000208058 Gja10Q9WUS4 505 aa27.51■■□□□ 1.99
Pcf11-204ENSMUST00000208058 Mybbp1aQ7TPV4 1344 aaKnown RBP27.5■■□□□ 1.99
Pcf11-204ENSMUST00000208058 Gm7347D3YYI9 267 aa27.5■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms