RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Map3k2Q61083 619 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ddx19aQ61655 478 aaKnown RBP14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Dph6Q9CQ28 267 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Arl1P61211 181 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ssh1Q76I79 1042 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Aldh1l1Q8R0Y6 902 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Smc1bQ920F6 1248 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Gnat3Q3V3I2 354 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ano2Q8CFW1 1002 aa14.37□□□□□ -0.11
Col6a3-208ENSMUST00000188587 TchpQ3TVW5 497 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Usp37Q8C0R0 979 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ccne1Q61457 408 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 ParvgQ9ERD8 331 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Plekho1Q9JIY0 408 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Pkd2l2Q9JLG4 621 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Il16O54824 1322 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Stx1aO35526 288 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Bms1Q6PGF5 1284 aaKnown RBP14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Myd88P22366 296 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Lrsam1Q80ZI6 727 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Hspa4Q61316 841 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Paip2Q9D6V8 124 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 WizO88286 1684 aaKnown RBP14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 InsrP15208 1372 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Metap2O08663 478 aaKnown RBP14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Gjc1P28229 396 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ssrp1Q08943 708 aaKnown RBP14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ctr9Q62018 1173 aaKnown RBP14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Triml1Q8BVP1 470 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Tmem266Q8BZB3 538 aa14.36□□□□□ -0.11
Col6a3-208ENSMUST00000188587 OvosQ3UU35 1456 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Terf1P70371 421 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Limch1Q3UH68 1057 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Glg1Q61543 1175 aaKnown RBP14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Atp2b1G5E829 1220 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 AdnpQ9Z103 1108 aaKnown RBP14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Map3k7clP58500 142 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Mex3cQ05A36 652 aaKnown RBP14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Soga3Q6NZL0 945 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Gm42641I6L9G2 585 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Akap2O54931 893 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ccdc129Q14B48 1034 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 AtripQ8BMG1 785 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 HellsQ60848 821 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Smco2Q9DA21 347 aa14.35□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Zfp853A0A1D5RM95 733 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ppfibp2O35711 882 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Map4k4P97820 1233 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Dzip1lQ499E4 774 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Il1rapl2Q9ERS6 686 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Kank1E9Q238 1360 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ktn1Q61595 1327 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Kif21bQ9QXL1 1668 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Camsap1A2AHC3 1581 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Stx8O88983 236 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Zmynd15Q8C0R7 736 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Slc4a2P13808 1237 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Caprin2Q05A80 1031 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Eif3j1Q3UGC7 261 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Eif3j2Q66JS6 263 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 SynmQ70IV5 1561 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Krt7Q9DCV7 457 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Mx2Q9WVP9 655 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Speer4f2E9Q366 295 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Bloc1s2Q9CWG9 143 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Mrpl44Q9CY73 333 aaKnown RBP14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Zbtb22Q9Z0G7 638 aa14.34□□□□□ -0.11
Col6a3-208ENSMUST00000188587 E9QMW4 1145 aa14.33□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Ppp1r9bQ6R891 817 aaKnown RBP14.33□□□□□ -0.11
Col6a3-208ENSMUST00000188587 Gas8Q60779 478 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Gm7347D3YYI9 267 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Speer4aF8VPX6 267 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Krt79Q8VED5 531 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Zscan29E9Q5B4 869 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Zc3h12cQ5DTV4 884 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Ccdc93Q7TQK5 629 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Ssx2ipQ8VC66 615 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Hdhd2Q3UGR5 259 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Haus2Q9CQS9 234 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Uso1Q9Z1Z0 959 aaKnown RBP14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Kifc2O08672 792 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Riok3Q9DBU3 519 aaKnown RBP14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Pde3aQ9Z0X4 1141 aa14.33□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Magi1Q6RHR9 1471 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Chmp6P0C0A3 200 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Rbm19Q8R3C6 952 aaKnown RBP14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Ccdc73Q8CDM4 1066 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Ccdc66Q6NS45 935 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 RalylQ8BTF8 293 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Als2cr12Q8BVM7 383 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Hdac9Q99N13 588 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 2310002L09RikQ9D7L5 217 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Wwc1Q5SXA9 1104 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Mcm3P25206 812 aaKnown RBP14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Gimap8Q75N62 688 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Farp2Q91VS8 1065 aa14.32□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Mroh7A2AVR2 1279 aa14.31□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Zbtb21E9Q444 1094 aa14.31□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Krt15Q61414 452 aa14.31□□□□□ -0.12
Col6a3-208ENSMUST00000188587 Sept11Q8C1B7 431 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 108.8 ms