RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Edc3Q8K2D3 508 aaKnown RBP16.36■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Psrc1Q9D0P7 329 aa16.36■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Crb1Q8VHS2 1405 aa16.36■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Nucb1Q02819 459 aaKnown RBP16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Chmp4cQ9D7F7 232 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Zeb2Q9R0G7 1215 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Eif3aP23116 1344 aaKnown RBP16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ddx60E9PZQ1 1711 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ets1P27577 440 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Zkscan2G3X952 960 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Morc2aQ69ZX6 1030 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 4933402E13RikQ9D4D2 429 aa16.35■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Anapc15-psA0A140T8L6 141 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Kcnh4A2A5F7 1018 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Hspa1lP16627 641 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ankle2Q6P1H6 964 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ccdc129Q14B48 1034 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Smg7Q5RJH6 1138 aaKnown RBP16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Sik1Q60670 779 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Soga3Q6NZL0 945 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ripor2Q80U16 1078 aa16.34■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Zbtb45Q52KG4 520 aa16.33■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ppip5k2Q6ZQB6 1129 aa16.33■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Trim52Q8CDV4 233 aa16.33■□□□□ 0.21
Rnf4-204ENSMUST00000182047 Ggt6Q6PDE7 497 aa16.33■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Zbtb3Q91X45 518 aa16.33■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Eno4Q8C042 619 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Adora1Q60612 326 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Fkbp5Q64378 456 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Mum1Q6DID5 682 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 GpkowQ56A08 488 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Nlrp9bQ66X22 1003 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Zbtb40Q6PCS8 1258 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Bloc1s4Q8VED2 215 aa16.32■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Adam1aQ60813 791 aa16.31■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Kif20aP97329 887 aa16.31■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Exoc5Q3TPX4 708 aa16.31■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Hdac6Q9Z2V5 1149 aa16.31■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Shank3Q4ACU6 1730 aa16.31■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Abcc4E9Q236 1325 aa16.3■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Gm12185Q5NCB2 835 aa16.3■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Stk3Q9JI10 497 aa16.3■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Cct4P80315 539 aaKnown RBP16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Rrp9Q91WM3 475 aaKnown RBP16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Erich6bQ9D4S6 220 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Kiaa0232Q80U59 1396 aaKnown RBP16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 PappaQ8R4K8 1624 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Ddx58Q6Q899 926 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Ltb4r2Q9JJL9 360 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Casq1O09165 405 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Unc5clQ6R653 518 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Shank2Q80Z38 1476 aa16.29■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Hsp90b1P08113 802 aaKnown RBP16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Dcaf5Q80T85 946 aa16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 4930504O13RikQ8C5Z9 145 aa16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Mast2Q60592 1734 aa16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Dhx38Q80X98 1228 aa16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Ankrd23Q812A3 306 aa16.28■□□□□ 0.2
Rnf4-204ENSMUST00000182047 InsrrQ9WTL4 1300 aa16.27■□□□□ 0.2
Rnf4-204ENSMUST00000182047 PtmaP26350 111 aa16.27■□□□□ 0.2
Rnf4-204ENSMUST00000182047 VgfQ0VGU4 617 aa16.27■□□□□ 0.2
Rnf4-204ENSMUST00000182047 Erc2Q6PH08 957 aa16.27■□□□□ 0.2
Rnf4-204ENSMUST00000182047 LratQ9JI60 231 aa16.27■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Ank1Q02357 1862 aa16.27■□□□□ 0.19
Rnf4-204ENSMUST00000182047 EspnlQ3UYR4 1005 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Bag4Q8CI61 457 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Igflr1Q3U4N7 345 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Fam228bQ497Q6 232 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Ankib1Q6ZPS6 1085 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 EngaseQ8BX80 734 aa16.26■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Rasa1E9PYG6 1038 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Nip7Q9CXK8 180 aaKnown RBP16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 AK157302I3ITR1 129 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Slc5a4bQ91ZP4 660 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Isca1Q9D924 129 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Erbb4Q61527 1308 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Myd88P22366 296 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Brf1Q8CFK2 676 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Ginm1Q91WR6 327 aa16.25■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Gnat3Q3V3I2 354 aa16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Mylk2Q8VCR8 613 aa16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Nav1Q8CH77 1875 aa16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Ddb1Q3U1J4 1140 aaKnown RBP16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Sf3b2Q3UJB0 878 aaKnown RBP16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Tshz3Q8CGV9 1081 aa16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Cwc25Q9DBF7 416 aa16.24■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Slc26a8Q8R0C3 999 aa16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Taf5lQ91WQ5 589 aa16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 AppP12023 770 aa16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Rrp12Q6P5B0 1295 aaKnown RBP16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Slfnl1Q8BHW9 410 aa16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Tnrc6cQ3UHC0 1690 aaKnown RBP16.23■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Bsdc1Q80Y55 427 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Stard3nlQ9DCI3 235 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Sos2Q02384 1333 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Neurod6P48986 337 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 PogkQ80TC5 607 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Pm20d1Q8C165 503 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Q8C5K5 320 aa16.22■□□□□ 0.19
Rnf4-204ENSMUST00000182047 Zbtb1Q91VL9 713 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms