RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Clcn1Q64347 994 aa19.43■□□□□ 0.7
Trim39-203ENSMUST00000113706 Zbtb3Q91X45 518 aa19.43■□□□□ 0.7
Trim39-203ENSMUST00000113706 Fkbp5Q64378 456 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Rfx1P48377 963 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Soga3Q6NZL0 945 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Kdm4cQ8VCD7 1054 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 4933416C03RikQ3V063 378 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Smg7Q5RJH6 1138 aaKnown RBP19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Fer1l6E0CZ42 1862 aa19.42■□□□□ 0.7
Trim39-203ENSMUST00000113706 Sipa1l3G3X9J0 1776 aa19.41■□□□□ 0.7
Trim39-203ENSMUST00000113706 InsrrQ9WTL4 1300 aa19.41■□□□□ 0.7
Trim39-203ENSMUST00000113706 Mylk2Q8VCR8 613 aa19.41■□□□□ 0.7
Trim39-203ENSMUST00000113706 Erc2Q6PH08 957 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Gm12185Q5NCB2 835 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Ginm1Q91WR6 327 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Hdac6Q9Z2V5 1149 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Lrp6O88572 1613 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Ccdc129Q14B48 1034 aa19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Tnrc6cQ3UHC0 1690 aaKnown RBP19.4■□□□□ 0.7
Trim39-203ENSMUST00000113706 Mst1rQ62190 1378 aa19.39■□□□□ 0.7
Trim39-203ENSMUST00000113706 Noc3lQ8VI84 807 aaKnown RBP19.39■□□□□ 0.69
Trim39-203ENSMUST00000113706 GpkowQ56A08 488 aa19.39■□□□□ 0.69
Trim39-203ENSMUST00000113706 Nwd2Q6P5U7 1742 aa19.39■□□□□ 0.69
Trim39-203ENSMUST00000113706 Ets1P27577 440 aa19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Exoc5Q3TPX4 708 aa19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Ddit3P35639 168 aa19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Adora1Q60612 326 aa19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Unc5clQ6R653 518 aa19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Edc3Q8K2D3 508 aaKnown RBP19.38■□□□□ 0.69
Trim39-203ENSMUST00000113706 Mrc1Q61830 1456 aa19.37■□□□□ 0.69
Trim39-203ENSMUST00000113706 Jarid2Q62315 1234 aa19.37■□□□□ 0.69
Trim39-203ENSMUST00000113706 1700010I14RikQ7TPG0 532 aa19.37■□□□□ 0.69
Trim39-203ENSMUST00000113706 Ankrd23Q812A3 306 aa19.37■□□□□ 0.69
Trim39-203ENSMUST00000113706 Hspa1lP16627 641 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Ltb4r2Q9JJL9 360 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 AK157302I3ITR1 129 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Cers3Q1A3B0 383 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Psrc1Q9D0P7 329 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Isca1Q9D924 129 aa19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Hsp90b1P08113 802 aaKnown RBP19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Nol8Q3UHX0 1147 aaKnown RBP19.36■□□□□ 0.69
Trim39-203ENSMUST00000113706 Gnat3Q3V3I2 354 aa19.35■□□□□ 0.69
Trim39-203ENSMUST00000113706 Fam228bQ497Q6 232 aa19.35■□□□□ 0.69
Trim39-203ENSMUST00000113706 Dmrtc1Q9D9R7 182 aa19.35■□□□□ 0.69
Trim39-203ENSMUST00000113706 Sos2Q02384 1333 aa19.35■□□□□ 0.69
Trim39-203ENSMUST00000113706 Dcaf5Q80T85 946 aa19.35■□□□□ 0.69
Trim39-203ENSMUST00000113706 Rnf123Q5XPI3 1314 aa19.34■□□□□ 0.69
Trim39-203ENSMUST00000113706 Pm20d1Q8C165 503 aa19.34■□□□□ 0.69
Trim39-203ENSMUST00000113706 Cwc25Q9DBF7 416 aa19.34■□□□□ 0.69
Trim39-203ENSMUST00000113706 Cacna1sQ02789 1880 aa19.33■□□□□ 0.69
Trim39-203ENSMUST00000113706 Taf5lQ91WQ5 589 aa19.33■□□□□ 0.68
Trim39-203ENSMUST00000113706 Stk3Q9JI10 497 aa19.33■□□□□ 0.68
Trim39-203ENSMUST00000113706 Myd88P22366 296 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Tmem87bQ8BKU8 555 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Stard3nlQ9DCI3 235 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Stk11ipQ3TAA7 1072 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Ssh1Q76I79 1042 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Gigyf1Q99MR1 1044 aaKnown RBP19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Rsph3aQ3UFY4 516 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Brf1Q8CFK2 676 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Ehd4Q9EQP2 541 aa19.32■□□□□ 0.68
Trim39-203ENSMUST00000113706 Ggt6Q6PDE7 497 aa19.31■□□□□ 0.68
Trim39-203ENSMUST00000113706 Kndc1Q0KK55 1742 aa19.31■□□□□ 0.68
Trim39-203ENSMUST00000113706 Zbtb45Q52KG4 520 aa19.31■□□□□ 0.68
Trim39-203ENSMUST00000113706 Ddb1Q3U1J4 1140 aaKnown RBP19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Ankib1Q6ZPS6 1085 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 AbraQ8BUZ1 375 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Sf3a1Q8K4Z5 791 aaKnown RBP19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Jmjd4Q8BFT6 427 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 4930504O13RikQ8C5Z9 145 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Slc5a4bQ91ZP4 660 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Nip7Q9CXK8 180 aaKnown RBP19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 EspnlQ3UYR4 1005 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Slc26a8Q8R0C3 999 aa19.3■□□□□ 0.68
Trim39-203ENSMUST00000113706 Dhx38Q80X98 1228 aa19.29■□□□□ 0.68
Trim39-203ENSMUST00000113706 Arap2Q8BZ05 1703 aa19.29■□□□□ 0.68
Trim39-203ENSMUST00000113706 Zkscan16A2ALW2 728 aa19.29■□□□□ 0.68
Trim39-203ENSMUST00000113706 Adam1aQ60813 791 aa19.29■□□□□ 0.68
Trim39-203ENSMUST00000113706 MetP16056 1379 aa19.28■□□□□ 0.68
Trim39-203ENSMUST00000113706 Q8C5K5 320 aa19.28■□□□□ 0.68
Trim39-203ENSMUST00000113706 Bag3Q9JLV1 577 aaKnown RBP19.28■□□□□ 0.68
Trim39-203ENSMUST00000113706 Cyp27a1Q9DBG1 533 aa19.28■□□□□ 0.68
Trim39-203ENSMUST00000113706 Pde4dQ01063 747 aa19.27■□□□□ 0.68
Trim39-203ENSMUST00000113706 Mrps27Q8BK72 415 aaKnown RBP19.27■□□□□ 0.68
Trim39-203ENSMUST00000113706 Fam213aQ9CYH2 218 aa19.27■□□□□ 0.68
Trim39-203ENSMUST00000113706 AtrnQ9WU60 1428 aa19.27■□□□□ 0.68
Trim39-203ENSMUST00000113706 Zbtb1Q91VL9 713 aa19.27■□□□□ 0.68
Trim39-203ENSMUST00000113706 Gnl3lQ6PGG6 577 aaKnown RBP19.27■□□□□ 0.67
Trim39-203ENSMUST00000113706 LratQ9JI60 231 aa19.27■□□□□ 0.67
Trim39-203ENSMUST00000113706 Dis3l2Q8CI75 870 aaKnown RBP19.26■□□□□ 0.67
Trim39-203ENSMUST00000113706 Eno4Q8C042 619 aa19.26■□□□□ 0.67
Trim39-203ENSMUST00000113706 Pmfbp1Q9WVQ0 1022 aa19.26■□□□□ 0.67
Trim39-203ENSMUST00000113706 AppP12023 770 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Mcm4P49717 862 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Sf3b2Q3UJB0 878 aaKnown RBP19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Tshz3Q8CGV9 1081 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Vps33bP59016 617 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Prl3d3A0A0M6L0J6 224 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Brpf1B2RRD7 1212 aa19.25■□□□□ 0.67
Trim39-203ENSMUST00000113706 Spryd3E9Q9B3 442 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms