RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Bcl9lQ67FY2 1494 aa18.85■□□□□ 0.61
Vcan-201ENSMUST00000109543 Plekhd1B2RPU2 505 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Slc5a1Q8C3K6 665 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 PtmsQ9D0J8 101 aaKnown RBP18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Abca15E9PWH4 1668 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Smarce1O54941 411 aaKnown RBP18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Atp6v1dP57746 247 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Dnajc5P60904 198 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 KinQ8K339 391 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Slx4ipQ9D7Y9 413 aa18.84■□□□□ 0.61
Vcan-201ENSMUST00000109543 Ppfia1B2RXQ2 1266 aa18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Utp18Q5SSI6 552 aaKnown RBP18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Jarid2Q62315 1234 aa18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Nlrp9bQ66X22 1003 aa18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Sf3a1Q8K4Z5 791 aaKnown RBP18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Top1mtQ8R4U6 593 aa18.83■□□□□ 0.6
Vcan-201ENSMUST00000109543 Zfp142G5E869 1843 aa18.82■□□□□ 0.6
Vcan-201ENSMUST00000109543 MypnQ5DTJ9 1315 aa18.82■□□□□ 0.6
Vcan-201ENSMUST00000109543 Slc26a8Q8R0C3 999 aa18.82■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ccdc7Q9D541 371 aa18.82■□□□□ 0.6
Vcan-201ENSMUST00000109543 PrkcshO08795 521 aa18.81■□□□□ 0.6
Vcan-201ENSMUST00000109543 NmiO35309 314 aa18.81■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ints3Q7TPD0 1041 aaKnown RBP18.81■□□□□ 0.6
Vcan-201ENSMUST00000109543 Tmx3Q8BXZ1 456 aa18.81■□□□□ 0.6
Vcan-201ENSMUST00000109543 Shank2Q80Z38 1476 aa18.81■□□□□ 0.6
Vcan-201ENSMUST00000109543 Isy1Q69ZQ2 285 aaKnown RBP18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 Gm45015A0A140LII9 184 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 Gm18336A0A140LIU8 765 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 GpkowQ56A08 488 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 Adora1Q60612 326 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 Pde3bQ61409 1100 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 St18Q80TY4 1045 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ripor2Q80U16 1078 aa18.8■□□□□ 0.6
Vcan-201ENSMUST00000109543 4930504O13RikQ8C5Z9 145 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Flad1Q8R123 492 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Il1rapl2Q9ERS6 686 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Bag3Q9JLV1 577 aaKnown RBP18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 DccP70211 1447 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ltbp4Q8K4G1 1666 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Gm21680A0A0G2JGR8 267 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Gjb2Q00977 226 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ankle2Q6P1H6 964 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Cadps2Q8BYR5 1297 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 InsrrQ9WTL4 1300 aa18.79■□□□□ 0.6
Vcan-201ENSMUST00000109543 Strn4P58404 760 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 PogkQ80TC5 607 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 Brinp3Q499E0 766 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ifit2Q64112 472 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 Acsbg1Q99PU5 721 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 Add2Q9QYB8 725 aa18.78■□□□□ 0.6
Vcan-201ENSMUST00000109543 Elmsan1E9Q2I4 1089 aaKnown RBP18.77■□□□□ 0.6
Vcan-201ENSMUST00000109543 ImpactO55091 318 aa18.77■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ddx19aQ61655 478 aaKnown RBP18.77■□□□□ 0.6
Vcan-201ENSMUST00000109543 Ddx11Q6AXC6 880 aa18.77■□□□□ 0.6
Vcan-201ENSMUST00000109543 Soga3Q6NZL0 945 aa18.77■□□□□ 0.6
Vcan-201ENSMUST00000109543 Fkbp5Q64378 456 aa18.77■□□□□ 0.59
Vcan-201ENSMUST00000109543 Ddx58Q6Q899 926 aa18.77■□□□□ 0.59
Vcan-201ENSMUST00000109543 HdgfP51859 237 aaKnown RBP18.76■□□□□ 0.59
Vcan-201ENSMUST00000109543 Cpa2Q504N0 417 aa18.76■□□□□ 0.59
Vcan-201ENSMUST00000109543 Ints5Q8CHT3 1018 aa18.76■□□□□ 0.59
Vcan-201ENSMUST00000109543 SlkO54988 1233 aa18.75■□□□□ 0.59
Vcan-201ENSMUST00000109543 AceP09470 1312 aa18.75■□□□□ 0.59
Vcan-201ENSMUST00000109543 Tmem87bQ8BKU8 555 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Trim52Q8CDV4 233 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Pof1bQ8K4L4 587 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Rufy3Q9D394 469 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Syde2E9PUP1 1314 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Neurod6P48986 337 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Dhx38Q80X98 1228 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Phf14Q9D4H9 881 aa18.74■□□□□ 0.59
Vcan-201ENSMUST00000109543 Gnat3Q3V3I2 354 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 Zbtb40Q6PCS8 1258 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 ZgpatQ8VDM1 511 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 Tti2Q8BGV4 512 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 Q8C5K5 320 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 Col4a1P02463 1669 aa18.73■□□□□ 0.59
Vcan-201ENSMUST00000109543 Rbm8a2A0A0N4SUH6 174 aa18.72■□□□□ 0.59
Vcan-201ENSMUST00000109543 Gadd45bP22339 160 aa18.72■□□□□ 0.59
Vcan-201ENSMUST00000109543 Rbm8aQ9CWZ3 174 aa18.72■□□□□ 0.59
Vcan-201ENSMUST00000109543 Cdhr2E9Q7P9 1308 aa18.72■□□□□ 0.59
Vcan-201ENSMUST00000109543 Ak2Q9WTP6 239 aa18.72■□□□□ 0.59
Vcan-201ENSMUST00000109543 AppP12023 770 aa18.71■□□□□ 0.59
Vcan-201ENSMUST00000109543 F2rP30558 430 aa18.71■□□□□ 0.59
Vcan-201ENSMUST00000109543 Mdm2P23804 489 aa18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 DbnlQ62418 436 aa18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 Slx1bQ8BX32 270 aa18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 Dis3l2Q8CI75 870 aaKnown RBP18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 Rhot2Q8JZN7 620 aa18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 LratQ9JI60 231 aa18.71■□□□□ 0.58
Vcan-201ENSMUST00000109543 Mst1rQ62190 1378 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 Gm9992B2RWK3 458 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 MecomP14404 1042 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 Unc93aQ710D3 458 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 Cdca7lQ922M5 438 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 Nphp3Q7TNH6 1325 aa18.7■□□□□ 0.58
Vcan-201ENSMUST00000109543 Sgsm2Q80U12 1005 aa18.69■□□□□ 0.58
Vcan-201ENSMUST00000109543 Ubxn10Q8BG34 277 aa18.69■□□□□ 0.58
Vcan-201ENSMUST00000109543 Q9D9S1 216 aa18.69■□□□□ 0.58
Vcan-201ENSMUST00000109543 Tiam2Q6ZPF3 1715 aa18.69■□□□□ 0.58
Vcan-201ENSMUST00000109543 Syt1P46096 421 aa18.69■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms