RNA–Protein interactions for RNA: ENSMUST00000103133.3

Smarce1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarce1, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1-201ENSMUST00000103133 Ccdc94Q9D6J3 314 aa17.46■□□□□ 0.39
Smarce1-201ENSMUST00000103133 Eif4g2Q62448 906 aaKnown RBP17.45■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Chd1lQ9CXF7 900 aa17.45■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Tjp1P39447 1745 aaKnown RBP17.45■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Prim1P20664 417 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Serpina10Q8R121 448 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Q9D2X8 372 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Kiaa0753Q6A000 959 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Ppip5k2Q6ZQB6 1129 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Cetn4Q8K4K1 168 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Gtf3c6Q9D8P7 227 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Zhx1P70121 873 aa17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Eif3bQ8JZQ9 803 aaKnown RBP17.44■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Kank4Q6P9J5 1016 aa17.43■□□□□ 0.38
Smarce1-201ENSMUST00000103133 LifrP42703 1092 aa17.43■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Prune1Q8BIW1 454 aa17.43■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Gripap1Q8VD04 806 aa17.42■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Nol12Q8BG17 217 aa17.42■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Prkar2bP31324 416 aa17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Fam13aQ8BGI4 693 aa17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Phkg2Q9DB30 406 aa17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Zcrb1Q9CZ96 217 aaKnown RBP17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Wwc1Q5SXA9 1104 aa17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Bcar3Q9QZK2 820 aa17.41■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Shank3Q4ACU6 1730 aa17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 TmpoQ61033 693 aaKnown RBP17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Kdm4aQ8BW72 1064 aa17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Tshz3Q8CGV9 1081 aa17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Hmgb2P30681 210 aaKnown RBP17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Gpatch11Q3UFS4 262 aa17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Olfml1Q8BSH2 233 aa17.4■□□□□ 0.38
Smarce1-201ENSMUST00000103133 Atp2b3Q0VF55 1220 aa17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Cyp27a1Q9DBG1 533 aa17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Fam50bQ9WTJ8 334 aa17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Adamtsl1Q8BLI0 1745 aa17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Pdia3P27773 505 aaKnown RBP17.39■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Cpa2Q504N0 417 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Speer4bQ9D9F7 267 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Kif4P33174 1231 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 MpndQ3TV65 487 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Anp32cQ64G17 123 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Ppp6r3Q922D4 844 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Grpel1Q99LP6 217 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Pdzd9Q9D9M4 266 aa17.38■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Gm21680A0A0G2JGR8 267 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Cavin1O54724 392 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Rbm42Q91V81 474 aaKnown RBP17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Sos2Q02384 1333 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Crb1Q8VHS2 1405 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Phactr2B1AVP0 632 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Ptgs1P22437 602 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Kiaa1211Q5PR69 1207 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Afg3l2Q8JZQ2 802 aaKnown RBP17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 CenppQ9CZ92 286 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 GakQ99KY4 1305 aa17.37■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Ccdc6D3YZP9 469 aa17.36■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Fam83gQ5SWY7 812 aa17.36■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Sos1Q62245 1319 aa17.36■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Ric1Q69ZJ7 1422 aa17.35■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Bach2P97303 839 aa17.35■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Ncbp1Q3UYV9 790 aaKnown RBP17.35■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Rps6ka4Q9Z2B9 773 aa17.35■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Atg4a-psA0A0G2JFS9 396 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Hmox1P14901 289 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Atg4aQ8C9S8 396 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Kiaa0319Q5SZV5 1081 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Tiam2Q6ZPF3 1715 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Kndc1Q0KK55 1742 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Nucb1Q02819 459 aaKnown RBP17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Brd2Q7JJ13 798 aaKnown RBP17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Asic4Q7TNS7 539 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Sytl4Q9R0Q1 673 aa17.34■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Pnpla7A2AJ88 1352 aa17.33■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Hsp90b1P08113 802 aaKnown RBP17.33■□□□□ 0.37
Smarce1-201ENSMUST00000103133 HnrnpuQ8VEK3 800 aaKnown RBP17.33■□□□□ 0.37
Smarce1-201ENSMUST00000103133 Rgs17Q9QZB0 210 aa17.33■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Anapc15-psA0A140T8L6 141 aa17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Cyp46a1Q9WVK8 500 aa17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Larp1Q6ZQ58 1072 aaKnown RBP17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Lrit1Q8K099 624 aa17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Inpp5bQ8K337 993 aa17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Chmp7Q8R1T1 451 aa17.32■□□□□ 0.36
Smarce1-201ENSMUST00000103133 MarsQ68FL6 902 aaKnown RBP17.31■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Slc5a1Q8C3K6 665 aa17.31■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Kif3aP28741 701 aa17.31■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Ppfibp2O35711 882 aa17.3■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Zfp251Q6PCX8 632 aa17.3■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Arhgap33Q80YF9 1305 aa17.3■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Sv2bQ8BG39 683 aa17.3■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Rtf1A2AQ19 715 aaKnown RBP17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 GalcP54818 684 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Q3TQI7 289 aaKnown RBP17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Srgap3Q812A2 1099 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Stac3Q8BZ71 360 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Gm21663A0A0G2JE01 267 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Gm7361D3Z6R1 267 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 5031410I06RikE9Q4E0 267 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Gm1979E9QAN3 267 aa17.29■□□□□ 0.36
Smarce1-201ENSMUST00000103133 Gm5862K7N5V5 267 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms