RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 U2surpQ6NV83 1029 aaKnown RBP17.91■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 Slc51aQ8R000 340 aa17.91■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 Zfp646Q6NV66 1788 aa17.91■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 XpcP51612 930 aa17.9■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 Zc3h12cQ5DTV4 884 aa17.9■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 Ltb4r2Q9JJL9 360 aa17.9■□□□□ 0.46
Ccdc58-201ENSMUST00000099937 BcorQ8CGN4 1759 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 D830030K20RikE9PYQ5 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gm3043K7N693 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gm16440K7N6G6 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gm2244L7N2A3 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gm3278L7N2D2 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gm8271L7N2E2 218 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Znf428Q8C1M2 176 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Cdc37l1Q9CZP7 335 aa17.89■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Dok7Q18PE0 504 aa17.88■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Fkbp1aP26883 108 aaKnown RBP17.87■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Ptcd1Q8C2E4 695 aaKnown RBP17.87■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 St5Q924W7 1134 aa17.87■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Mapk8ip1Q9WVI9 707 aa17.87■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Cct4P80315 539 aaKnown RBP17.86■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gas2l2Q5SSG4 860 aa17.86■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Gimap8Q75N62 688 aa17.86■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Usp16Q99LG0 825 aa17.86■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Usp34Q6ZQ93 3582 aa17.86■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Ankrd31A0A140LI88 1765 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Pde4bB1AWC9 736 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Slc4a2P13808 1237 aaKnown RBP17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Flt4P35917 1363 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Ank1Q02357 1862 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Zbtb40Q6PCS8 1258 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Plekhh1Q80TI1 1356 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Strip1Q8C079 837 aa17.85■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Atp6v0a2P15920 856 aa17.84■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Q3TQI7 289 aaKnown RBP17.84■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 PsapQ61207 557 aaKnown RBP17.84■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 PdgfdQ925I7 370 aa17.84■□□□□ 0.45
Ccdc58-201ENSMUST00000099937 Aplp1Q03157 653 aa17.83■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Foxo3Q9WVH4 672 aa17.83■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Gnai1B2RSH2 354 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 PgfP49764 158 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Stra8P70278 393 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Dpf2Q61103 391 aaKnown RBP17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 CrbnQ8C7D2 445 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Trim34aQ99PP6 485 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Gnai3Q9DC51 354 aa17.82■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 MypnQ5DTJ9 1315 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Olfr247E9PVJ7 320 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 AK157302I3ITR1 129 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Olfr819K7N727 320 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Mrs2Q5NCE8 434 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ankle2Q6P1H6 964 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ankib1Q6ZPS6 1085 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Gpr101Q80T62 511 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Isca1Q9D924 129 aa17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Upf1Q9EPU0 1124 aaKnown RBP17.81■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Scn9aQ62205 1984 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ttc21aQ8C0S4 1314 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Cnksr1A2A9K7 700 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Cyp19a1P28649 503 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 SobpQ0P5V2 864 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Chrna5Q2MKA5 467 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Morc2aQ69ZX6 1030 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ncbp3Q8BZR9 615 aaKnown RBP17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Socs7Q8VHQ2 579 aa17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Rbm5Q91YE7 815 aaKnown RBP17.8■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Igflr1Q3U4N7 345 aa17.79■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ppp1r3fQ9JIG4 799 aa17.79■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ankrd50F7BE84 1390 aa17.79■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 NpcdF8VQB8 469 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 CoilQ5SU73 570 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Fam83gQ5SWY7 812 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Gja10Q9WUS4 505 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Foxo4Q9WVH3 505 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Lgr5Q9Z1P4 907 aa17.78■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Neurod2Q62414 383 aa17.77■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Vil1Q62468 827 aa17.77■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Rasgrp4Q8BTM9 673 aa17.77■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Ppm1mQ8BU27 406 aa17.77■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Arap2Q8BZ05 1703 aa17.77■□□□□ 0.44
Ccdc58-201ENSMUST00000099937 Mybbp1aQ7TPV4 1344 aaKnown RBP17.76■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Psd3Q2PFD7 1037 aa17.76■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Gtpbp6Q3U6U5 514 aa17.76■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Gnl3lQ6PGG6 577 aaKnown RBP17.76■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Bicc1Q99MQ1 977 aaKnown RBP17.76■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Ttc41Q692V3 1318 aa17.75■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Tspoap1Q7TNF8 1846 aa17.75■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Rbm25B2RY56 838 aaKnown RBP17.75■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Usp48Q3V0C5 1052 aa17.75■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Mex3cQ05A36 652 aaKnown RBP17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Stxbp5lQ5DQR4 1185 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Irf9Q61179 399 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 DaglaQ6WQJ1 1044 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Skor1Q8BX46 964 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Stk32bQ9JJX8 414 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Btaf1E9QAE3 1848 aa17.74■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Vamp4O70480 141 aa17.73■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Hoxd11P23813 323 aa17.73■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Atp2b4Q6Q477 1205 aa17.73■□□□□ 0.43
Ccdc58-201ENSMUST00000099937 Clca2Q8BG22 942 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms