RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Cd109Q8R422 1442 aa17.33■□□□□ 0.36
Chd3-201ENSMUST00000092971 Zkscan7E9PVW1 718 aa17.33■□□□□ 0.36
Chd3-201ENSMUST00000092971 RragbQ6NTA4 374 aa17.33■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ccdc25Q78PG9 208 aa17.33■□□□□ 0.36
Chd3-201ENSMUST00000092971 Bag4Q8CI61 457 aa17.33■□□□□ 0.36
Chd3-201ENSMUST00000092971 TnikP83510 1323 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Dapk3O54784 448 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Vgll3P85442 326 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Sept11Q8C1B7 431 aaKnown RBP17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Api5O35841 504 aaKnown RBP17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 LrpprcQ6PB66 1392 aaKnown RBP17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Zfp853A0A1D5RM95 733 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 DesP31001 469 aaKnown RBP17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 LyarQ08288 388 aaKnown RBP17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Sun3Q5SS91 320 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Soga3Q6NZL0 945 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 PdiltQ9DAN1 588 aa17.32■□□□□ 0.36
Chd3-201ENSMUST00000092971 Traf3ip1Q149C2 625 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 LarsQ8BMJ2 1178 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Nsfl1cQ9CZ44 370 aaKnown RBP17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ppfibp1Q8C8U0 969 aaKnown RBP17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ift140E9PY46 1464 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Camk4P08414 469 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Spa17Q62252 149 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ppp1r9aH3BJD6 1292 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Usp5P56399 858 aaKnown RBP17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Sdccag8Q80UF4 717 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 4931400O07RikQ9D4M5 137 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 Synj1Q8CHC4 1574 aa17.31■□□□□ 0.36
Chd3-201ENSMUST00000092971 TprnA2AI08 749 aaKnown RBP17.3■□□□□ 0.36
Chd3-201ENSMUST00000092971 Dnm1P39053 867 aa17.3■□□□□ 0.36
Chd3-201ENSMUST00000092971 Znf18Q810A1 556 aa17.3■□□□□ 0.36
Chd3-201ENSMUST00000092971 Metap2O08663 478 aaKnown RBP17.3■□□□□ 0.36
Chd3-201ENSMUST00000092971 Slc7a3P70423 618 aa17.3■□□□□ 0.36
Chd3-201ENSMUST00000092971 ChkbO55229 394 aa17.29■□□□□ 0.36
Chd3-201ENSMUST00000092971 DonsonQ9QXP4 560 aa17.29■□□□□ 0.36
Chd3-201ENSMUST00000092971 Snx25Q3ZT31 840 aa17.29■□□□□ 0.36
Chd3-201ENSMUST00000092971 Akr1c19G3X9Y6 323 aa17.29■□□□□ 0.36
Chd3-201ENSMUST00000092971 Aldh1l1Q8R0Y6 902 aa17.29■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ppp1r21Q3TDD9 780 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Igflr1Q3U4N7 345 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Tbc1d9Q3UYK3 1264 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Krt15Q61414 452 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Kmt5bQ3U8K7 883 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 DymQ8CHY3 669 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Krt7Q9DCV7 457 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Uso1Q9Z1Z0 959 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Nphp3Q7TNH6 1325 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Fez2Q6TYB5 348 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Bicd1Q8BR07 835 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Yeats4Q9CR11 227 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Gsta4P24472 222 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ddx27Q921N6 760 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Ttc5Q99LG4 440 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Mrpl44Q9CY73 333 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 RarsQ9D0I9 660 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Akap8Q9DBR0 687 aaKnown RBP17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Znf287Q9EQB9 759 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 Vps8Q0P5W1 1427 aa17.28■□□□□ 0.36
Chd3-201ENSMUST00000092971 F2rP30558 430 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Caprin2Q05A80 1031 aaKnown RBP17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Naa25Q8BWZ3 972 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Eif3bQ8JZQ9 803 aaKnown RBP17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Slc14a2Q8R4T9 930 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Apbb1ipQ8R5A3 670 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Usp25P57080 1055 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Eef2P58252 858 aaKnown RBP17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Gbp2Q9Z0E6 589 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Plekhm2Q80TQ5 1018 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Kiaa1524Q8BWY9 907 aa17.27■□□□□ 0.36
Chd3-201ENSMUST00000092971 Slc5a1Q8C3K6 665 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Uba5Q8VE47 403 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 GnpatP98192 678 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ift122Q6NWV3 1182 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Kiaa1328Q6NZK5 612 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Klhl30Q8C3F7 581 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Klc3Q91W40 508 aa17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 Sf3a3Q9D554 501 aaKnown RBP17.27■□□□□ 0.35
Chd3-201ENSMUST00000092971 AmfrQ9R049 643 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Eef1dP57776 281 aaKnown RBP17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Tex35Q14BK3 207 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 AdnpQ9Z103 1108 aaKnown RBP17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Snx13Q6PHS6 957 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ublcp1Q8BGR9 318 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Igbp1bQ9QZ29 343 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Sbno1Q689Z5 1390 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Mtus1Q5HZI1 1210 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gas8Q60779 478 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ccdc148Q6P5U8 527 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ift74Q8BKE9 600 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Syt10Q9R0N4 523 aa17.26■□□□□ 0.35
Chd3-201ENSMUST00000092971 Art2aP17981 287 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Bloc1s2Q9CWG9 143 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Psmb7P70195 277 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Gse1Q3U3C9 1213 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Cyp7a1Q64505 503 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ano6Q6P9J9 911 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Bzw2Q91VK1 419 aaKnown RBP17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Psmd6Q99JI4 389 aa17.25■□□□□ 0.35
Chd3-201ENSMUST00000092971 Ccne1Q61457 408 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms