RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Cyb5rlB1AS42 316 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Frmd3Q8BHD4 595 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Gnl2Q99LH1 728 aaKnown RBP18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Ppfia3P60469 1194 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Kdm4aQ8BW72 1064 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Nlgn1Q99K10 843 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 CenpqQ9CPQ5 267 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Cers3Q1A3B0 383 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 SfswapQ3USH5 945 aaKnown RBP18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Zrsr2Q62377 462 aaKnown RBP18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Tmem266Q8BZB3 538 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Efcab2Q9CQ46 164 aa18.53■□□□□ 0.56
Ret-202ENSMUST00000088790 Zmym3Q9JLM4 1370 aa18.52■□□□□ 0.56
Ret-202ENSMUST00000088790 Rufy1Q8BIJ7 712 aa18.52■□□□□ 0.56
Ret-202ENSMUST00000088790 Ppp4r3bQ922R5 820 aa18.52■□□□□ 0.56
Ret-202ENSMUST00000088790 Kdm5cP41230 1554 aa18.52■□□□□ 0.56
Ret-202ENSMUST00000088790 NpatQ8BMA5 1420 aa18.52■□□□□ 0.55
Ret-202ENSMUST00000088790 Nip7Q9CXK8 180 aaKnown RBP18.52■□□□□ 0.55
Ret-202ENSMUST00000088790 Kiaa1551Q5DTW7 1521 aa18.52■□□□□ 0.55
Ret-202ENSMUST00000088790 Rad50P70388 1312 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Adcy5P84309 1262 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Bloc1s4Q8VED2 215 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Mrpl44Q9CY73 333 aaKnown RBP18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Mmp8O70138 465 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Bicc1Q99MQ1 977 aaKnown RBP18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 AU022751B1B0V2 589 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Zbtb21E9Q444 1094 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Cyp7a1Q64505 503 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 ThemisQ8BGW0 636 aa18.51■□□□□ 0.55
Ret-202ENSMUST00000088790 Map3k4O08648 1597 aa18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Rnf41Q8BH75 317 aa18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Kif3cO35066 796 aa18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Nsfl1cQ9CZ44 370 aaKnown RBP18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Ncbp1Q3UYV9 790 aaKnown RBP18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Phldb2Q8K1N2 1249 aa18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Ftsj3Q9DBE9 838 aaKnown RBP18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 Plekho1Q9JIY0 408 aa18.5■□□□□ 0.55
Ret-202ENSMUST00000088790 HmmrQ00547 794 aaKnown RBP18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Ccdc150Q8CDI7 1110 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Nup133Q8R0G9 1155 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Kdm3aQ6PCM1 1323 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Nphp3Q7TNH6 1325 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Speer4dL7N216 212 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Tmc2Q8R4P4 888 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Zbtb3Q91X45 518 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 AnkarA2RT91 1465 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Snap23O09044 210 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Trim28Q62318 834 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 Ifit1bl2Q3U687 466 aa18.49■□□□□ 0.55
Ret-202ENSMUST00000088790 F2rP30558 430 aa18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Abcd1P48410 736 aa18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Larp1Q6ZQ58 1072 aaKnown RBP18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Otud6bQ8K2H2 294 aa18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Ccdc102aQ3TMW1 549 aa18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Cep112Q5PR68 954 aa18.48■□□□□ 0.55
Ret-202ENSMUST00000088790 Ccnl1Q52KE7 532 aaKnown RBP18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Mtmr3Q8K296 1196 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Srgap1Q91Z69 1062 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Ccdc96Q9CR92 584 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 IkQ9Z1M8 557 aaKnown RBP18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Zkscan16A2ALW2 728 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Sycp1Q62209 993 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Ercc6lQ8BHK9 1240 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Mmel1Q9JLI3 765 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Eif4g3Q80XI3 1579 aaKnown RBP18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Kiaa1107Q80TK0 1369 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Idi1P58044 227 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Igflr1Q3U4N7 345 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Ppp4r3aQ6P2K6 820 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Jarid2Q62315 1234 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Rad17Q6NXW6 688 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Gdpd2Q9ESM6 539 aa18.47■□□□□ 0.55
Ret-202ENSMUST00000088790 Pdzrn3Q69ZS0 1063 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Gm21985Q6P6P5 1106 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Luzp1Q8R4U7 1068 aaKnown RBP18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Mdm2P23804 489 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Fam160b2Q80YR2 744 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Znf653Q6YND2 615 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Galntl5Q9D4M9 431 aa18.46■□□□□ 0.55
Ret-202ENSMUST00000088790 Ppp6r3Q922D4 844 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Rai14Q9EP71 979 aaKnown RBP18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Kdm6bQ5NCY0 1641 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 PzpQ61838 1495 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Jakmip2D3YXK0 820 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Bin1O08539 588 aaKnown RBP18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Gadd45bP22339 160 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Atp2b3Q0VF55 1220 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Ifit2Q64112 472 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Fam213aQ9CYH2 218 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Syt1P46096 421 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Tm6sf1P58749 370 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Bms1Q6PGF5 1284 aaKnown RBP18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Fnbp4Q6ZQ03 1031 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Slc13a4Q8BZ82 625 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Ppp1r21Q3TDD9 780 aa18.45■□□□□ 0.54
Ret-202ENSMUST00000088790 Usp19Q3UJD6 1360 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Stk36Q69ZM6 1316 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Atg4a-psA0A0G2JFS9 396 aa18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Metap2O08663 478 aaKnown RBP18.44■□□□□ 0.54
Ret-202ENSMUST00000088790 Stx1aO35526 288 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms