RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Rell1Q8K2J7 272 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pde4aO89084 844 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ctnna1P26231 906 aaKnown RBP10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Traf1P39428 409 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tmod1P49813 359 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ttc29Q80VM3 471 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Adamts2Q8C9W3 1213 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Stx12Q9ER00 274 aa10.39□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pibf1E9Q6K3 756 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pdha1P35486 390 aaKnown RBP10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sde2Q8K1J5 448 aaKnown RBP10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ascc2Q91WR3 749 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ttll5Q8CHB8 1328 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Spocd1B1ASB6 936 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tshz3Q8CGV9 1081 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 HscbQ8K3A0 234 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Cabp4Q8VHC5 271 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Dbn1Q9QXS6 706 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sh2d4bA6X942 431 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ripor2Q80U16 1078 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pnpla2Q8BJ56 486 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Armcx6Q8K3A6 301 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Kif5aP33175 1027 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Brd9Q3UQU0 596 aaKnown RBP10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pcdhb17Q91VD8 799 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Cdc45Q9Z1X9 566 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Cyp2ab1S4R196 498 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 LarsQ8BMJ2 1178 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Chchd4Q8VEA4 139 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Rilpl1Q9JJC6 406 aa10.38□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Mcm3P25206 812 aaKnown RBP10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Lrch1P62046 709 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 HelbQ6NVF4 1074 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pkd2l1A2A259 760 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Trim75Q3UWZ0 467 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tmcc2Q80W04 706 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 IqubQ8CDK3 788 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sept14Q9DA97 430 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Chmp2aQ9DB34 222 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Proca1B0QZF7 307 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Krt10P02535 570 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Katnal1Q8K0T4 488 aa10.37□□□□□ -0.75
Clcn3-202ENSMUST00000056508 NmiO35309 314 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ptpn14Q62130 1189 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Q9DAR0 182 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tpcn1Q9EQJ0 817 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sema3eP70275 775 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pip4k2bQ80XI4 416 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Slc39a3Q99K24 317 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 RarsQ9D0I9 660 aaKnown RBP10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ccdc65Q8VHI7 493 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 4931400O07RikQ9D4M5 137 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Usp48Q3V0C5 1052 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ehmt1Q5DW34 1296 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Prdm1Q60636 856 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Wdr43Q6ZQL4 677 aaKnown RBP10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Grpel1Q99LP6 217 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Syap1Q9D5V6 365 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Mylk4Q5SUV5 386 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ms4a5Q810P8 197 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 MlxiplQ99MZ3 864 aa10.36□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Mnat1P51949 309 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sept8Q8CHH9 429 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Slc4a8Q8JZR6 1089 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 1700020D05RikQ99PB1 294 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tomm20Q9DCC8 145 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Eepd1Q3TGW2 569 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Jade1Q6ZPI0 834 aaKnown RBP10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Larp6Q8BN59 492 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ggt7Q99JP7 662 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Nphp1Q9QY53 687 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 CenpqQ9CPQ5 267 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Cd2apQ9JLQ0 637 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Pabpc1lA2A5N3 607 aaKnown RBP10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Utp15Q8C7V3 528 aaKnown RBP10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Mospd1Q8VEL0 213 aa10.35□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Zfpm1O35615 995 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 VimP20152 466 aaKnown RBP10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tcea3P23881 347 aaKnown RBP10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Cnnm2Q3TWN3 875 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Spout1Q3UHX9 385 aaKnown RBP10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Sh3bgrl2Q8BG73 107 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Anapc5Q8BTZ4 740 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Ubr7Q8BU04 425 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Snx5Q9D8U8 404 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Efcc1Q9JJF6 558 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Nhsl2B1AXH1 854 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Serpina3gQ5I2A0 440 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Abhd8Q8R0P8 439 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Gbp2Q9Z0E6 589 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Tbc1d2bQ3U0J8 965 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 Foxd4Q60688 444 aa10.34□□□□□ -0.75
Clcn3-202ENSMUST00000056508 IntuQ059U7 942 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Serpina10Q8R121 448 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Spaca1Q9DA48 305 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Appbp2Q9DAX9 585 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Il16O54824 1322 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Lrfn1Q2WF71 766 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Pak3Q61036 559 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Utp14aQ640M1 767 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms