RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Snw1Q9CSN1 536 aaKnown RBP19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Rfx7F8VPJ6 1459 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Fam170aQ66LM6 333 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Zranb1Q7M760 708 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ccdc93Q7TQK5 629 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Vps16Q920Q4 839 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Kank1E9Q238 1360 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Fam135aQ6NS59 1506 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Arglu1Q3UL36 271 aaKnown RBP19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ddx46Q569Z5 1032 aaKnown RBP19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ankrd1Q9CR42 319 aa19.99■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ppfia1B2RXQ2 1266 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Paxbp1P58501 919 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Spg7Q3ULF4 781 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Matr3Q8K310 846 aaKnown RBP19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Tceanc2Q8R2M0 207 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Stx8O88983 236 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 FanclQ9CR14 375 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Homer1Q9Z2Y3 366 aa19.98■□□□□ 0.79
Usp48-201ENSMUST00000055131 Smc1bQ920F6 1248 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Dapk3O54784 448 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Sil1Q9EPK6 465 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 TimelessQ9R1X4 1197 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Mtmr3Q8K296 1196 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Slc14a2Q8R4T9 930 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Hmg20bQ9Z104 317 aa19.97■□□□□ 0.79
Usp48-201ENSMUST00000055131 Zmym4A2A791 1549 aaKnown RBP19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Triml1Q8BVP1 470 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ccdc73Q8CDM4 1066 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Echdc1Q9D9V3 322 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Ankle2Q6P1H6 964 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Cep135Q6P5D4 1140 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Rprd2Q6NXI6 1469 aaKnown RBP19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 RalgapbQ8BQZ4 1484 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Nkx1-2P42580 305 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Usp25P57080 1055 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 LlphQ9D945 130 aaKnown RBP19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Bms1Q6PGF5 1284 aaKnown RBP19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Erlin1Q91X78 346 aa19.96■□□□□ 0.79
Usp48-201ENSMUST00000055131 Nop53Q8BK35 484 aaKnown RBP19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Tmx1Q8VBT0 278 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 ParvgQ9ERD8 331 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Atp2b1G5E829 1220 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Tmem132eQ6IEE6 982 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Dph6Q9CQ28 267 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ythdc2B2RR83 1445 aaKnown RBP19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Naip5Q9R016 1403 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Uspl1Q3ULM6 1089 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Farp2Q91VS8 1065 aa19.95■□□□□ 0.78
Usp48-201ENSMUST00000055131 Mlh3A0A1Y7VMP7 1443 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Rnf216P58283 853 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Fam83gQ5SWY7 812 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 RarsQ9D0I9 660 aaKnown RBP19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Camsap2Q8C1B1 1461 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Vps18Q8R307 973 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Speer4dL7N216 212 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Pde4dQ01063 747 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Kmt5bQ3U8K7 883 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 U2af1l4Q8BGJ9 220 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Dnm1P39053 867 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 Krt23Q99PS0 422 aa19.94■□□□□ 0.78
Usp48-201ENSMUST00000055131 CebpzP53569 1052 aaKnown RBP19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ccdc12Q8R344 166 aaKnown RBP19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Srgap1Q91Z69 1062 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 2310002L09RikQ9D7L5 217 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Gng11P61953 73 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Mctp2Q5RJH2 878 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Frmpd2A0A140LI67 1392 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Nphp3Q7TNH6 1325 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Trim27Q62158 513 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 AI481877A2ALV5 1481 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ces1aE9PYP1 563 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Bbof1Q3V079 533 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Znf18Q810A1 556 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Fam43aQ8BUP8 424 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ccdc112A0AUP1 442 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Izumo3A6PWV3 263 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 LarsQ8BMJ2 1178 aa19.93■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ankrd40Q5SUE8 363 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Rbbp8nlA2ABX0 614 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Cetn1P41209 172 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Exoc5Q3TPX4 708 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Nip7Q9CXK8 180 aaKnown RBP19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 PaskQ8CEE6 1383 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Igflr1Q3U4N7 345 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ctr9Q62018 1173 aaKnown RBP19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Sass6Q80UK7 654 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 Slc5a4bQ91ZP4 660 aa19.92■□□□□ 0.78
Usp48-201ENSMUST00000055131 DymQ8CHY3 669 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Krt25Q8VCW2 446 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Lmbr1lQ9D1E5 489 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Cfap73J3QPZ5 306 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Gm21985Q6P6P5 1106 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Rbm8a2A0A0N4SUH6 174 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Rbm8aQ9CWZ3 174 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Plekho1Q9JIY0 408 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Calml4Q91WQ9 153 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ttc21aQ8C0S4 1314 aa19.91■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ktn1Q61595 1327 aaKnown RBP19.9■□□□□ 0.78
Usp48-201ENSMUST00000055131 Ercc3P49135 783 aa19.9■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 78 ms