RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 MecomP14404 1042 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tmem87bQ8BKU8 555 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Slx4ipQ9D7Y9 413 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Q9D9S1 216 aa11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Psma5Q9Z2U1 241 aaKnown RBP11.18□□□□□ -0.62
Usp28-201ENSMUST00000047349 Gtf2a1Q99PM3 378 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Lmbr1lQ9D1E5 489 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Bag3Q9JLV1 577 aaKnown RBP11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Casc1Q6TDU8 730 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Flad1Q8R123 492 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Mlh1Q9JK91 760 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tbc1d4Q8BYJ6 1307 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ankle2Q6P1H6 964 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ddx58Q6Q899 926 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Shank2Q80Z38 1476 aa11.17□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tubb6Q922F4 447 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Phlpp1Q8CHE4 1687 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Pa2g4P50580 394 aaKnown RBP11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ifit2Q64112 472 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Slc26a8Q8R0C3 999 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Ssfa2Q922B9 1252 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Fam228bQ497Q6 232 aa11.16□□□□□ -0.62
Usp28-201ENSMUST00000047349 Kiaa0232Q80U59 1396 aaKnown RBP11.15□□□□□ -0.62
Usp28-201ENSMUST00000047349 Fez1Q8K0X8 392 aa11.15□□□□□ -0.62
Usp28-201ENSMUST00000047349 Tns2Q8CGB6 1400 aa11.15□□□□□ -0.62
Usp28-201ENSMUST00000047349 Nkx2-3P97334 362 aa11.15□□□□□ -0.63
Usp28-201ENSMUST00000047349 Zpr1Q62384 459 aa11.15□□□□□ -0.63
Usp28-201ENSMUST00000047349 ZgpatQ8VDM1 511 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Add2Q9QYB8 725 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Tti2Q8BGV4 512 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ppm1mQ8BU27 406 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Syt1P46096 421 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gnat3Q3V3I2 354 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 SrrtQ99MR6 875 aaKnown RBP11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Chmp4cQ9D7F7 232 aa11.14□□□□□ -0.63
Usp28-201ENSMUST00000047349 Q8C5K5 320 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Smc4Q8CG47 1286 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Pof1bQ8K4L4 587 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Erich6bQ9D4S6 220 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Stx6Q9JKK1 255 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Hmg20bQ9Z104 317 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Erbb4Q61527 1308 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Asic4Q7TNS7 539 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Atf7Q8R0S1 413 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 NaspQ99MD9 773 aaKnown RBP11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Fam50bQ9WTJ8 334 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Syce3B5KM66 88 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Elmsan1E9Q2I4 1089 aaKnown RBP11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Cers3Q1A3B0 383 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 GpkowQ56A08 488 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Sgsm2Q80U12 1005 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Pdia6Q922R8 440 aaKnown RBP11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Med4Q9CQA5 270 aa11.13□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rbm8a2A0A0N4SUH6 174 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Fkbp5Q64378 456 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ppp4r3aQ6P2K6 820 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Slc5a1Q8C3K6 665 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rbm8aQ9CWZ3 174 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Slit1Q80TR4 1531 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm21663A0A0G2JE01 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ccdc173A0JLY1 547 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm7361D3Z6R1 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Fam184aE9PW83 1143 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 5031410I06RikE9Q4E0 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm1979E9QAN3 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm5862K7N5V5 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm10220K7N660 267 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 EspnlQ3UYR4 1005 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Wdr93Q402B2 695 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ccar2Q8VDP4 922 aaKnown RBP11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rrp9Q91WM3 475 aaKnown RBP11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ak2Q9WTP6 239 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 InsrrQ9WTL4 1300 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ddx60E9PZQ1 1711 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Cpa2Q504N0 417 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Kdm4aQ8BW72 1064 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rufy3Q9D394 469 aa11.12□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rbm27Q5SFM8 1060 aaKnown RBP11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Prkab2Q6PAM0 271 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Pdcl2Q78Y63 240 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Efcab2Q9CQ46 164 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Speer4bQ9D9F7 267 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gadd45bP22339 160 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Nlrp9bQ66X22 1003 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Il1rapl2Q9ERS6 686 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 DccP70211 1447 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ube2hP62257 183 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Rapgef3Q8VCC8 918 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Stard3nlQ9DCI3 235 aa11.11□□□□□ -0.63
Usp28-201ENSMUST00000047349 Neurod6P48986 337 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Soga3Q6NZL0 945 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Paxip1Q6NZQ4 1056 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Nap1l3Q794H2 544 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ush1cQ9ES64 910 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Gm9992B2RWK3 458 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Unc93aQ710D3 458 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ppp6r1Q7TSI3 856 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Dmrt2Q8BG36 561 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Cadps2Q8BYR5 1297 aa11.1□□□□□ -0.63
Usp28-201ENSMUST00000047349 Ubxn10Q8BG34 277 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms