RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Kcnh5Q920E3 988 aa21.4■■□□□ 1.02
Ebf3-201ENSMUST00000033378 Baiap2l1Q9DBJ3 514 aa21.4■■□□□ 1.02
Ebf3-201ENSMUST00000033378 Zfp251Q6PCX8 632 aa21.39■■□□□ 1.02
Ebf3-201ENSMUST00000033378 Cdca8Q8BHX3 289 aa21.39■■□□□ 1.02
Ebf3-201ENSMUST00000033378 Eif3bQ8JZQ9 803 aaKnown RBP21.39■■□□□ 1.02
Ebf3-201ENSMUST00000033378 Sdc2P43407 202 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Txndc16Q7TN22 820 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ccdc73Q8CDM4 1066 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Trim34aQ99PP6 485 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ndufa8Q9DCJ5 172 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ano6Q6P9J9 911 aa21.39■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Tspyl3Q3UYP3 334 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Jade2Q6ZQF7 829 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ccdc12Q8R344 166 aaKnown RBP21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Atp10dQ8K2X1 1416 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Gm45140A0A0N4SUM8 220 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Riok1Q922Q2 567 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Sbno1Q689Z5 1390 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Tmem87bQ8BKU8 555 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Aldh1l2Q8K009 923 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Themis2Q91YX0 663 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ttc21aQ8C0S4 1314 aa21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ddx46Q569Z5 1032 aaKnown RBP21.38■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Nphp3Q7TNH6 1325 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ssh2Q5SW75 1423 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Plekhd1B2RPU2 505 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ano1Q8BHY3 960 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Larp6Q8BN59 492 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Dydc1Q9D9T0 175 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Rad50P70388 1312 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Nsfl1cQ9CZ44 370 aaKnown RBP21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ppp1r3fQ9JIG4 799 aa21.37■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Gm10563F6WIE4 79 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Cfap69Q8BH53 942 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Nol11Q8BJW5 723 aaKnown RBP21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 GmnnO88513 206 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Tmx1Q8VBT0 278 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Mindy4Q3UQI9 744 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ncapg2Q6DFV1 1138 aa21.36■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Fancd2Q80V62 1450 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 AU022751B1B0V2 589 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Hoxb7P09024 217 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Brms1Q99N20 246 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Tti2Q8BGV4 512 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Tacc1Q6Y685 774 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 U2af1l4Q8BGJ9 220 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Dync1i1O88485 628 aa21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ddx27Q921N6 760 aaKnown RBP21.35■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Rbbp8nlA2ABX0 614 aa21.34■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Prim1P20664 417 aa21.34■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ppp6r3Q922D4 844 aa21.34■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Ell2Q3UKU1 639 aa21.34■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Zkscan4Q5SZT6 480 aa21.34■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Gnat3Q3V3I2 354 aa21.33■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Dapk3O54784 448 aa21.33■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Lrrfip1Q3UZ39 729 aaKnown RBP21.33■■□□□ 1.01
Ebf3-201ENSMUST00000033378 Pip4k2bQ80XI4 416 aa21.33■■□□□ 1
Ebf3-201ENSMUST00000033378 Gbp4Q61107 620 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Mapk8ip1Q9WVI9 707 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Samd9lQ69Z37 1561 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Eif4a2P10630 407 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Pa2g4P50580 394 aaKnown RBP21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Ccdc162pQ0VG85 912 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Gm21985Q6P6P5 1106 aa21.32■■□□□ 1
Ebf3-201ENSMUST00000033378 Ampd3O08739 766 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Rapgef4Q9EQZ6 1011 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Rad23bP54728 416 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Fam76aQ922G2 307 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Ssr1Q9CY50 286 aaKnown RBP21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Nsd3Q6P2L6 1439 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Rnf34Q99KR6 376 aa21.31■■□□□ 1
Ebf3-201ENSMUST00000033378 Dnm1P39053 867 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Vps16Q920Q4 839 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Metap2O08663 478 aaKnown RBP21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Ppp1r10Q80W00 888 aaKnown RBP21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Cep131Q62036 1060 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Ifit2Q64112 472 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Anp32cQ64G17 123 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Brd3Q8K2F0 726 aaKnown RBP21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Myd88P22366 296 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Aifm3Q3TY86 605 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Nup133Q8R0G9 1155 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 OvosQ3UU35 1456 aa21.3■■□□□ 1
Ebf3-201ENSMUST00000033378 Bbof1Q3V079 533 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Klhl10Q9D5V2 608 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Mipol1Q9D9F8 279 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Klhl30Q8C3F7 581 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Galntl5Q9D4M9 431 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Irx4Q9QY61 515 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Nlrp3Q8R4B8 1033 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Ak2Q9WTP6 239 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Utp18Q5SSI6 552 aaKnown RBP21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Tmem132eQ6IEE6 982 aa21.29■■□□□ 1
Ebf3-201ENSMUST00000033378 Ddx54Q8K4L0 874 aaKnown RBP21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Lmbr1lQ9D1E5 489 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Rufy3Q9D394 469 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Kdm5bQ80Y84 1544 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 IkQ9Z1M8 557 aaKnown RBP21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 Pola1P33609 1465 aa21.28■■□□□ 1
Ebf3-201ENSMUST00000033378 PxdnQ3UQ28 1475 aa21.28■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms