RNA–Protein interactions for RNA: ENSMUST00000029812.13

Nfkb1-201, Transcript of Nuclear factor NF-kappa-B p105 subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nfkb1, Length 4,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1-201ENSMUST00000029812 SfswapQ3USH5 945 aaKnown RBP17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Mum1Q6DID5 682 aa17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ano6Q6P9J9 911 aa17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Otud6bQ8K2H2 294 aa17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Tmc2Q8R4P4 888 aa17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Mapk8ip1Q9WVI9 707 aa17.69■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ifit2Q64112 472 aa17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 ImmtQ8CAQ8 757 aaKnown RBP17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Zscan20B2KFW1 1030 aa17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ano1Q8BHY3 960 aa17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 SetQ9EQU5 289 aaKnown RBP17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 NapbP28663 298 aa17.68■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Hoxb7P09024 217 aa17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 LyarQ08288 388 aaKnown RBP17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Gzf1Q4VBD9 706 aa17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Prkab2Q6PAM0 271 aa17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ak2Q9WTP6 239 aa17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Znf518aB2RRF6 1478 aaKnown RBP17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Vps54Q5SPW0 977 aa17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Elp1Q7TT37 1333 aaKnown RBP17.67■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 SrrtQ99MR6 875 aaKnown RBP17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 NgdnQ9DB96 315 aaKnown RBP17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ptch1Q61115 1434 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Gnat3Q3V3I2 354 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Larp1Q6ZQ58 1072 aaKnown RBP17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Nphp4P59240 1425 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Pet2A2AHY8 747 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Timm10P62073 90 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Aldh1l2Q8K009 923 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 ScaperF8VQ70 1398 aaKnown RBP17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Ddx58Q6Q899 926 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Slc13a4Q8BZ82 625 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Kdm4cQ8VCD7 1054 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Rapgef4Q9EQZ6 1011 aa17.66■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Cep120Q7TSG1 988 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 U2af1l4Q8BGJ9 220 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Lmod1Q8BVA4 595 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Trim30cD3YVI9 513 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Prl7d1P04769 244 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Abcd1P48410 736 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Cfap69Q8BH53 942 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Vps16Q920Q4 839 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Sil1Q9EPK6 465 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Cnpy2Q9QXT0 182 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Tyro3P55144 880 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 DymQ8CHY3 669 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Nup133Q8R0G9 1155 aa17.65■□□□□ 0.42
Nfkb1-201ENSMUST00000029812 Tango6Q8C3S2 1079 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ets1P27577 440 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Dnm1P39053 867 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Nlrp3Q8R4B8 1033 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Abcc1O35379 1528 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Hap1O35668 628 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ppm1fQ8CGA0 452 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Mrpl44Q9CY73 333 aaKnown RBP17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ccdc39Q9D5Y1 937 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Pprc1Q6NZN1 1644 aa17.64■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Idi1P58044 227 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Cdkl5Q3UTQ8 938 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Uri1Q3TLD5 531 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Nlgn1Q99K10 843 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Syt10Q9R0N4 523 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Tarbp1E9Q368 1579 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 SphkapQ6NSW3 1687 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Abca5Q8K448 1642 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Dhx8A2A4P0 1244 aaKnown RBP17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Plekhd1B2RPU2 505 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Zhx1P70121 873 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Rufy1Q8BIJ7 712 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Vps18Q8R307 973 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Farp2Q91VS8 1065 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ftsj3Q9DBE9 838 aaKnown RBP17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Arhgef11Q68FM7 1552 aa17.63■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Srgap1Q91Z69 1062 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Tmem87bQ8BKU8 555 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 CenphQ9QYM8 241 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 CtcfQ61164 736 aaKnown RBP17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Sycp1Q62209 993 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Hoxc9P09633 260 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 CenpqQ9CPQ5 267 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ccdc96Q9CR92 584 aa17.62■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 NmiO35309 314 aa17.61■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ubash3aQ3V3E1 624 aa17.61■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Znf131Q8K3J5 619 aa17.61■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Pde4bB1AWC9 736 aa17.61■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Lrrfip2Q91WK0 415 aa17.61■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Krt25Q8VCW2 446 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Amotl1Q9D4H4 968 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Cwc25Q9DBF7 416 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Nucb2P81117 420 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Utp18Q5SSI6 552 aaKnown RBP17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Ankle2Q6P1H6 964 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Themis2Q91YX0 663 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Stx1aO35526 288 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Hoxa7P02830 229 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Tm6sf1P58749 370 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Dhx38Q80X98 1228 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Necab1Q8BG18 352 aa17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Rbm17Q8JZX4 405 aaKnown RBP17.6■□□□□ 0.41
Nfkb1-201ENSMUST00000029812 Nat10Q8K224 1024 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms