RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Gps2Q921N8 327 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Ubn2Q80WC1 1314 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Brpf3B2KF05 1204 aaKnown RBP13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Hnrnph1O35737 449 aaKnown RBP13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Surf1P09925 306 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 SkilQ60665 675 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Dusp9Q7TNL7 452 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Tmco3Q8BH01 678 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Suds3Q8BR65 328 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Mrpl12Q9DB15 201 aaKnown RBP13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Gdpd2Q9ESM6 539 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Lmbr1Q9JIT0 490 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Magi1Q6RHR9 1471 aa13.5□□□□□ -0.25
Trim55-201ENSMUST00000029139 Trappc8E9PWG2 1437 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Setd1aE9PYH6 1716 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Gm45015A0A140LII9 184 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Gm18336A0A140LIU8 765 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Brd1E9PZ26 1189 aaKnown RBP13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Nrg3O35181 713 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Hnrnph2P70333 449 aaKnown RBP13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Smarcc2Q6PDG5 1213 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Styxl1Q9DAR2 321 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Tbc1d9Q3UYK3 1264 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Esyt3Q5DTI8 891 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Rps6ka6Q7TPS0 764 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Hmgn5Q9JL35 406 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Ptch1Q61115 1434 aa13.49□□□□□ -0.25
Trim55-201ENSMUST00000029139 Casz1Q9CWL2 1761 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Nub1P54729 614 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 U2surpQ6NV83 1029 aaKnown RBP13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Ppp4r3bQ922R5 820 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Pmfbp1Q9WVQ0 1022 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Nrxn3Q6P9K9 1571 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Nf2P46662 596 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 CgnP59242 1191 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Pcmtd1P59913 357 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Rassf10Q8BL43 508 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Cep89Q9CZX2 791 aa13.48□□□□□ -0.25
Trim55-201ENSMUST00000029139 Scaf11E9PZM7 1456 aaKnown RBP13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Robo2Q7TPD3 1470 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Prpf38aQ4FK66 312 aaKnown RBP13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Zfp446Q8C9M8 523 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Chic2Q9D9G3 165 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 AvenQ9D9K3 342 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Grik3B1AS29 919 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Actn3O88990 900 aaKnown RBP13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Sh2b1Q91ZM2 756 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Ccdc39Q9D5Y1 937 aa13.47□□□□□ -0.25
Trim55-201ENSMUST00000029139 Cfap65Q3V0B4 1847 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 AU019823E9PUQ3 292 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Cplx2P84086 134 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Golga2Q921M4 999 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Elf2Q9JHC9 593 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Usp19Q3UJD6 1360 aa13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Iqgap1Q9JKF1 1657 aaKnown RBP13.46□□□□□ -0.25
Trim55-201ENSMUST00000029139 Zpr1Q62384 459 aa13.46□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ftsj3Q9DBE9 838 aaKnown RBP13.46□□□□□ -0.26
Trim55-201ENSMUST00000029139 Cyp27a1Q9DBG1 533 aa13.46□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tpcn1Q9EQJ0 817 aa13.46□□□□□ -0.26
Trim55-201ENSMUST00000029139 Hmgb1P63158 215 aaKnown RBP13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Cgnl1Q6AW69 1298 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 GphnQ8BUV3 769 aaKnown RBP13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Rbbp5Q8BX09 538 aaKnown RBP13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Kdm5aQ3UXZ9 1690 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Usp25P57080 1055 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Baiap3Q80TT2 1134 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tbc1d7Q9D0K0 293 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Trim42Q9D2H5 723 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 ErmapQ9JLN5 566 aa13.45□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nwd1A6H603 1563 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Gm15262A0A140LIQ5 728 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Cnbd1B1AWM0 430 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Elf1Q60775 612 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Dnaaf4Q8R368 420 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Thoc1Q8R3N6 657 aaKnown RBP13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nrbp1Q99J45 535 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tlcd1Q99JT6 247 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ranbp17Q99NF8 1088 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ano6Q6P9J9 911 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ciz1Q8VEH2 845 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nfu1Q9QZ23 255 aa13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ktn1Q61595 1327 aaKnown RBP13.44□□□□□ -0.26
Trim55-201ENSMUST00000029139 Mnat1P51949 309 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tex11Q14AT2 947 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Polr3aB2RXC6 1390 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ccdc102aQ3TMW1 549 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Tcp11l1Q8BTG3 509 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Mkrn1Q9QXP6 481 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Scnn1bQ9WU38 638 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Rfx7F8VPJ6 1459 aa13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Dhx9O70133 1380 aaKnown RBP13.43□□□□□ -0.26
Trim55-201ENSMUST00000029139 Rps6ka3P18654 740 aaKnown RBP13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Stk11ipQ3TAA7 1072 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Rgl3Q3UYI5 709 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Lemd3Q9WU40 921 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Coro1cQ9WUM4 474 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Nek4Q9Z1J2 792 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Wdr63B2RY71 923 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Ppfia4B8QI36 1187 aa13.42□□□□□ -0.26
Trim55-201ENSMUST00000029139 Add3Q9QYB5 706 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms