RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SFRP5Q5T4F7 317 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ZNF836Q6ZNA1 936 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 TFGQ92734 400 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ZNF347Q96SE7 839 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 COPZ2Q9P299 210 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 PISDQ9UG56 409 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RHBDD3Q9Y3P4 386 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SRPRAP08240 638 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RGS6P49758 472 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ROR2Q01974 943 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ESX1Q8N693 406 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 CREB3L1Q96BA8 519 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 MOCOSQ96EN8 888 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 IL17FQ96PD4 163 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 CPEB1Q9BZB8 566 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 DCKP27707 260 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 LCN1P31025 176 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ZNF81P51508 661 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 HNRNPDQ14103 355 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 COL28A1Q2UY09 1125 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 LY6G5CQ5SRR4 150 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 OSTM1Q86WC4 334 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SVOPLQ8N434 492 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RAB36O95755 333 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SERINC3Q13530 473 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 METTL2BQ6P1Q9 378 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 C2orf15Q8WU43 125 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 CMTM7Q96FZ5 175 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SULT4A1Q9BR01 284 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SLC32A1Q9H598 525 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 PLSCR3Q9NRY6 295 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 NPHS1O60500 1241 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 FBXO45P0C2W1 286 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 ANXA3P12429 323 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 MLF1P58340 268 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RHDQ02161 417 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 IER5LQ5T953 404 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 GJD3Q8N144 294 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 WFIKKN2Q8TEU8 576 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SLC22A17Q8WUG5 538 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 BADQ92934 168 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RAB11FIP5Q9BXF6 653 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 SLC22A4Q9H015 551 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 TSPAN15O95858 294 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 RPS3P23396 243 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 APLNRP35414 380 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 HEPHL1Q6MZM0 1159 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 C12orf45Q8N5I9 185 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 OR2T27Q8NH04 317 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 OR5K1Q8NHB7 308 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 PFDN5Q99471 154 aa16.28■□□□□ 0.2
CACNA1A-253ENST00000637927 PEAK1Q9H792 1746 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 AGAP5A6NIR3 686 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 HOXB9P17482 250 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 ETV3P41162 512 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 MAP4K2Q12851 820 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 LIPKQ5VXJ0 399 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 OR2M4Q96R27 311 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 TWNKQ96RR1 684 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 MACROD1Q9BQ69 325 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 NUDT22Q9BRQ3 303 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 NLE1Q9NVX2 485 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 C14orf119Q9NWQ9 140 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 TUSC2O75896 110 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 RAP2AP10114 183 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 CHRNB4P30926 498 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 CAMLGP49069 296 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 SCCPDHQ8NBX0 429 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 B4GALT7Q9UBV7 327 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 PUS1Q9Y606 427 aaKnown RBP eCLIP16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 SMSP52788 366 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 TRIM73Q86UV7 250 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 OR4C15Q8NGM1 316 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 FAM46BQ96A09 425 aa16.27■□□□□ 0.2
CACNA1A-253ENST00000637927 F5H0A9 414 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 CSTAP01040 98 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 RPL35P42766 123 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 ZXDBP98169 803 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 SLAMF1Q13291 335 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 ARL14Q8N4G2 192 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 CDKN2AIPNLQ96HQ2 116 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 ZNF845Q96IR2 970 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 CENPBD1B2RD01 187 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 XCR1P46094 333 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 NCEH1Q6PIU2 408 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 LHFPL3Q86UP9 236 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 THAP4Q8WY91 577 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 ZBTB26Q9HCK0 441 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 ERVK-19Q9WJR5 959 aa16.27■□□□□ 0.19
CACNA1A-253ENST00000637927 H3BQ06 376 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-253ENST00000637927 GCH1P30793 250 aa16.26■□□□□ 0.19
CACNA1A-253ENST00000637927 MAP2K4P45985 399 aa16.26■□□□□ 0.19
CACNA1A-253ENST00000637927 ASRGL1Q7L266 308 aa16.26■□□□□ 0.19
CACNA1A-253ENST00000637927 OR52B2Q96RD2 323 aa16.26■□□□□ 0.19
CACNA1A-253ENST00000637927 OBP2BQ9NPH6 170 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms