RNA–Protein interactions for RNA: ENST00000530295.5

NDUFS3-208, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 3

Gene NDUFS3, Length 253 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-208ENST00000530295 ATP5A1P25705 553 aaKnown RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 STT3AP46977 705 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 KCNC1P48547 511 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 MASP1P48740 699 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 HNMTP50135 292 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 HERVK_113P63132 956 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ERVK-8P63133 956 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 FOXF2Q12947 444 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 RCAN2Q14206 197 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ZNF460Q14592 562 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 EIPR1Q53HC9 387 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 SPANXN3Q5MJ09 141 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 WIPI1Q5MNZ9 446 aaPredicted RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 DCST1Q5T197 706 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 TEDDM1Q5T9Z0 273 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 UBE3DQ7Z6J8 389 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 LRRC75A-AS1Q8N1F1 130 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ACOT4Q8N9L9 421 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 MBD3L2Q8NHZ7 208 aaPredicted RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 SMPDL3BQ92485 455 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ABTB1Q969K4 478 aaPredicted RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 PIGTQ969N2 578 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ISL2Q96A47 359 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 CERS2Q96G23 380 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 WDYHV1Q96HA8 205 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ART5Q96L15 291 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 GNRHR2Q96P88 292 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 KCNC2Q96PR1 638 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 KRT12Q99456 494 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 UGT2B28Q9BY64 529 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ROGDIQ9GZN7 287 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 C6orf203Q9P0P8 240 aaPredicted RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 CTNNAL1Q9UBT7 734 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 TRPS1Q9UHF7 1281 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ZNF490Q9ULM2 529 aaPredicted RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 OARD1Q9Y530 152 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 USF3Q68DE3 2245 aa13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 CHD3Q12873 2000 aaKnown RBP13.8□□□□□ -0.2
NDUFS3-208ENST00000530295 MXRA5Q9NR99 2828 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 EFCAB8A8MWE9 144 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 TP53I11O14683 189 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 TTC4O95801 387 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CTAGE8P0CG41 777 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 ZNF37AP17032 561 aaPredicted RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 SLC6A12P48065 614 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 FBXW4P57775 412 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CDKL1Q00532 357 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CBLBQ13191 982 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 ZNF267Q14586 743 aaPredicted RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 TSNQ15631 228 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 HP1BP3Q5SSJ5 553 aaPredicted RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 PLXDC2Q6UX71 529 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 RNF111Q6ZNA4 994 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CTAGE4Q8IX94 777 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 PPIL6Q8IXY8 311 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 DND1Q8IYX4 353 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 NKAPQ8N5F7 415 aaKnown RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 SLC44A1Q8WWI5 657 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 ESAMQ96AP7 390 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 PBKQ96KB5 322 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 RILPQ96NA2 401 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 TBCDQ9BTW9 1192 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 UBTD1Q9HAC8 227 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 NDRG3Q9UGV2 375 aa13.79□□□□□ -0.2
NDUFS3-208ENST00000530295 SAP18O00422 153 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 HPNP05981 417 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 TUBBP07437 444 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 SLCO1A2P46721 670 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 PLIN5Q00G26 463 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 SRYQ05066 204 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 DOC2AQ14183 400 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 NTRK2Q16620 822 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 TBCELQ5QJ74 424 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 YRDCQ86U90 279 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 IGDCC3Q8IVU1 814 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 TAGAPQ8N103 731 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 SRFBP1Q8NEF9 429 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 INTS12Q96CB8 462 aaKnown RBP13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 FBXL20Q96IG2 436 aa13.78□□□□□ -0.2
NDUFS3-208ENST00000530295 CCL19Q99731 98 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms