RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TRIM73	Q86UV7	250 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	P3H2	Q8IVL5	708 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	ALDH16A1	Q8IZ83	802 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	DEPDC4	Q8N2C3	294 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	CHDH	Q8NE62	594 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	OR13H1	Q8NG92	308 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	NT5C	Q8TCD5	201 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	ZFAND2B	Q8WV99	257 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	KLHDC7B	Q96G42	594 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	TOE1	Q96GM8	510 aa	Known RBP	10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	AMDHD1	Q96NU7	426 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	SERINC2	Q96SA4	455 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	GPR174	Q9BXC1	333 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	NPL	Q9BXD5	320 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	AMBRA1	Q9C0C7	1298 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	OR51I1	Q9H343	314 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	KLHL31	Q9H511	634 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	FANCE	Q9HB96	536 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	CD93	Q9NPY3	652 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	C1GALT1	Q9NS00	363 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	TAS2R7	Q9NYW3	318 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	WARS2	Q9UGM6	360 aa	Known RBP	10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	KLHL20	Q9Y2M5	609 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	SH3GLB1	Q9Y371	365 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	ENPP4	Q9Y6X5	453 aa		10.19	□□□□□ -0.78
SPIDR-222	ENST00000524006	NCOR2	Q9Y618	2525 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PRAMEF33	A0A0G2JMD5	474 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006		A0A0J9YVX5	310 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006		A0A0J9YY10	115 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	GLOD5	A6NK44	160 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ZNF701	M0R085	212 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	EMC8	O43402	210 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	NARS	O43776	548 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PRICKLE3	O43900	615 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	MITF	O75030	526 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	KLHL18	O94889	574 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	CCDC159	P0C7I6	412 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	RHCE	P18577	417 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	MAG	P20916	626 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	CALR	P27797	417 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PIGA	P37287	484 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	SLC19A1	P41440	591 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	FRK	P42685	505 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	OR1E2	P47887	323 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	DAP	P51397	102 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	MVD	P53602	400 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	UGT2B15	P54855	530 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PCBP3	P57721	371 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PCBP4	P57723	403 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	TNFRSF17	Q02223	184 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	CD47	Q08722	323 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	TDG	Q13569	410 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	MEP1A	Q16819	746 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	EXOC3L2	Q2M3D2	409 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ADPRM	Q3LIE5	342 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	FAM180B	Q6P0A1	224 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	FAHD1	Q6P587	224 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	KLHL35	Q6PF15	583 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	FIGLA	Q6QHK4	219 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ZNF793	Q6ZN11	406 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	DEF8	Q6ZN54	512 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	UBE3D	Q7Z6J8	389 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	PARG	Q86W56	976 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	RBM12B	Q8IXT5	1001 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	SMYD1	Q8NB12	490 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	BPIFB6	Q8NFQ5	453 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	CCL4L1	Q8NHW4	92 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	SUN3	Q8TAQ9	357 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	XAGE5	Q8WWM1	108 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	NCSTN	Q92542	709 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	RAB8B	Q92930	207 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	BMF	Q96LC9	184 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	COL21A1	Q96P44	957 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	NODAL	Q96S42	347 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	SARG	Q9BW04	601 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ABCG4	Q9H172	646 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	GLIPR2	Q9H4G4	154 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	EPS8L2	Q9H6S3	715 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	SLAMF7	Q9NQ25	335 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	LHX9	Q9NQ69	397 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	MS4A12	Q9NXJ0	267 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	TMEM9	Q9P0T7	183 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	CPNE7	Q9UBL6	633 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	APOBEC3B	Q9UH17	382 aa	Known RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	LYVE1	Q9Y5Y7	322 aa		10.18	□□□□□ -0.78
SPIDR-222	ENST00000524006	TRIM64C	A6NLI5	447 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006		B4DGG1	531 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	VILL	O15195	856 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	EML2	O95834	649 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	AGR2	O95994	175 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	EIF2S1	P05198	315 aa	Known RBP	10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	OR12D1	P0DN82	309 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	TNFRSF1B	P20333	461 aa		10.17	□□□□□ -0.78
SPIDR-222	ENST00000524006	CD72	P21854	359 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms