RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 RRADP55042 308 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 DUSP2Q05923 314 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 BIKQ13323 160 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 PDE7AQ13946 482 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 LTB4RQ15722 352 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 PRSS53Q2L4Q9 553 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 BTBD16Q32M84 506 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 CRTC2Q53ET0 693 aaPredicted RBP13.99□□□□□ -0.17
NUP54-213ENST00000513352 CCDC116Q8IYX3 515 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 CLEC1AQ8NC01 280 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 ADCY4Q8NFM4 1077 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 OR14A16Q8NHC5 309 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 ZFP28Q8NHY6 868 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 C10orf82Q8WW14 230 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 DAZLQ92904 295 aaKnown RBP13.99□□□□□ -0.17
NUP54-213ENST00000513352 RIT1Q92963 219 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 TUBB6Q9BUF5 446 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 CNPPD1Q9BV87 410 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 OR8D2Q9GZM6 311 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 EPN3Q9H201 632 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 COPG1Q9Y678 874 aaKnown RBP13.99□□□□□ -0.17
NUP54-213ENST00000513352 PCSK5Q92824 1860 aa13.99□□□□□ -0.17
NUP54-213ENST00000513352 MAP1BP46821 2468 aaKnown RBP13.99□□□□□ -0.17
NUP54-213ENST00000513352 PTPRQQ9UMZ3 2332 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 SLC22A3O75751 556 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 LAMP1P11279 417 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 PCSK2P16519 638 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 S100A3P33764 101 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 GPC1P35052 558 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 HSPB3Q12988 150 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 SQLEQ14534 574 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 ZNF267Q14586 743 aaPredicted RBP13.98□□□□□ -0.17
NUP54-213ENST00000513352 DCAF10Q5QP82 559 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 CPZQ66K79 652 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 PAOXQ6QHF9 649 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 C19orf48Q6RUI8 117 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 DGAT2L6Q6ZPD8 337 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 GALNT12Q8IXK2 581 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 RIMKLAQ8IXN7 391 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 OR9A2Q8NGT5 310 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 ZBED6CLQ96FA7 236 aaPredicted RBP13.98□□□□□ -0.17
NUP54-213ENST00000513352 TEX37Q96LM6 180 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 DUSP26Q9BV47 211 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
NUP54-213ENST00000513352 A6NL46 340 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 MYO1GB0I1T2 1018 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ANKRD28O15084 1053 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 CFLARO15519 480 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SNX3O60493 162 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 TBX19O60806 448 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ITGA3P26006 1051 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 IL12AP29459 219 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ATP4BP51164 291 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 MANFP55145 182 aaKnown RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 C21orf58P58505 322 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SLC26A5P58743 744 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 EXT1Q16394 746 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 FAM174BQ3ZCQ3 159 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 AGKQ53H12 422 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SPANXN4Q5MJ08 99 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 IRAK1BP1Q5VVH5 260 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 OR4F3Q6IEY1 312 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ZNF551Q7Z340 670 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 SZRD1Q7Z422 152 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 TMEM102Q8N9M5 508 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 OR9I1Q8NGQ6 314 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SLC2A12Q8TD20 617 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 PTPMT1Q8WUK0 201 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 KAT2AQ92830 837 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 NCLNQ969V3 563 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ZNF764Q96H86 408 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 CRELD1Q96HD1 420 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ART5Q96L15 291 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ZNF681Q96N22 645 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 WDR77Q9BQA1 342 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 ING2Q9H160 280 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 CLMPQ9H6B4 373 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ATP13A2Q9NQ11 1180 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
NUP54-213ENST00000513352 TAS2R7Q9NYW3 318 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 COPS7AQ9UBW8 275 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 ERVK-19Q9WJR5 959 aa13.97□□□□□ -0.17
NUP54-213ENST00000513352 MED13Q9UHV7 2174 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 ASPMQ8IZT6 3477 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 TRBV11-1A0A0K0K1C0 115 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 A0A1W2PRB8 838 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 NR5A2O00482 541 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 SHOX2O60902 331 aaPredicted RBP13.96□□□□□ -0.17
NUP54-213ENST00000513352 ATP1B1P05026 303 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 ABCB1P08183 1280 aaPredicted RBP13.96□□□□□ -0.17
NUP54-213ENST00000513352 CELA2AP08217 269 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 GPX3P22352 226 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 CCL11P51671 97 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 POLR2JP52435 117 aaKnown RBP13.96□□□□□ -0.17
NUP54-213ENST00000513352 DGKQP52824 942 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 KCNK10P57789 538 aa13.96□□□□□ -0.17
NUP54-213ENST00000513352 AIMP2Q13155 320 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms