RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OR6B1O95007 311 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 GP1BBP13224 206 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 SOX3P41225 446 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 KCNK10P57789 538 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 TRA2BP62995 288 aaKnown RBP18.83■□□□□ 0.6
GTF3A-202ENST00000419181 ERVK-8P63133 956 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 ZNF267Q14586 743 aaPredicted RBP18.83■□□□□ 0.6
GTF3A-202ENST00000419181 PCLAFQ15004 111 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 CFAP157Q5JU67 520 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 LIPMQ5VYY2 423 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 SLC48A1Q6P1K1 146 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 GFRALQ6UXV0 394 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 SRRM1Q8IYB3 904 aaKnown RBP18.83■□□□□ 0.6
GTF3A-202ENST00000419181 OR4K14Q8NGD5 310 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 DOK4Q8TEW6 326 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 ASB15Q8WXK1 588 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 TMEM109Q9BVC6 243 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.83■□□□□ 0.6
GTF3A-202ENST00000419181 HPF1Q9NWY4 346 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 MCM8Q9UJA3 840 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 CES1P1Q9UKY3 287 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 RAB21Q9UL25 225 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 ERVK-19Q9WJR5 959 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 OSGIN2Q9Y236 505 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 SLC5A6Q9Y289 635 aa18.83■□□□□ 0.6
GTF3A-202ENST00000419181 KLF13Q9Y2Y9 288 aaPredicted RBP18.83■□□□□ 0.6
GTF3A-202ENST00000419181 ZNF354AO60765 605 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 UNC5CO95185 931 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 STSP08842 583 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 CPMP14384 443 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 SLC37A1P57057 533 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 RAE1P78406 368 aaKnown RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 HMGCS1Q01581 520 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 MPEG1Q2M385 716 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 SPIN4Q56A73 249 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 C10orf107Q8IVU9 208 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 SIAH3Q8IW03 269 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 MMP21Q8N119 569 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 CPSF7Q8N684 471 aaKnown RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 C11orf24Q96F05 449 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 IQCGQ9H095 443 aaKnown RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 CXorf21Q9HAI6 301 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 TNFRSF12AQ9NP84 129 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 SEC14L3Q9UDX4 400 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 ERVK-11Q9UQG0 969 aa18.82■□□□□ 0.6
GTF3A-202ENST00000419181 DIDO1Q9BTC0 2240 aaKnown RBP18.82■□□□□ 0.6
GTF3A-202ENST00000419181 WIPF3A6NGB9 483 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 CYSRT1A8MQ03 144 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 LDLRP01130 860 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 CLPSP04118 112 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 XKP51811 444 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 ALDH6A1Q02252 535 aaKnown RBP18.81■□□□□ 0.6
GTF3A-202ENST00000419181 ACSM2AQ08AH3 577 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 C4orf17Q53FE4 359 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 RNFT1Q5M7Z0 435 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 ACSM2BQ68CK6 577 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 GALNT18Q6P9A2 607 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 IL20RBQ6UXL0 311 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 RNF111Q6ZNA4 994 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 SULF2Q8IWU5 870 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 GALNT12Q8IXK2 581 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 PSD4Q8NDX1 1056 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 APIPQ96GX9 242 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 GPR137Q96N19 417 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 FAIM2Q9BWQ8 316 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 TIMMDC1Q9NPL8 285 aa18.81■□□□□ 0.6
GTF3A-202ENST00000419181 KLRC4-KLRK1H3BQV0 150 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 PCDH7O60245 1069 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 PORP16435 677 aaPredicted RBP18.8■□□□□ 0.6
GTF3A-202ENST00000419181 ZNF24P17028 368 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 MEOX1P50221 254 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 FUT7Q11130 342 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 ASPHQ12797 758 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 EBPQ15125 230 aaKnown RBP18.8■□□□□ 0.6
GTF3A-202ENST00000419181 ZNF750Q32MQ0 723 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 PIGGQ5H8A4 983 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 OPN5Q6U736 354 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 SCIMPQ6UWF3 145 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 POGLUT1Q8NBL1 392 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 GATA5Q9BWX5 397 aaPredicted RBP18.8■□□□□ 0.6
GTF3A-202ENST00000419181 WWTR1Q9GZV5 400 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 TSPAN10Q9H1Z9 355 aaPredicted RBP18.8■□□□□ 0.6
GTF3A-202ENST00000419181 SIRT5Q9NXA8 310 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 SLC17A7Q9P2U7 560 aa18.8■□□□□ 0.6
GTF3A-202ENST00000419181 GOLGA6L10A6NI86 522 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 OR6C76A6NM76 312 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 LRRTM2O43300 516 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 PEX1O43933 1283 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 TRIM13O60858 407 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 SPAG7O75391 227 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 NADKO95544 446 aaPredicted RBP18.79■□□□□ 0.6
GTF3A-202ENST00000419181 ATP1B1P05026 303 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 CT62P0C5K7 136 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 SSTR4P31391 388 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 TIA1P31483 386 aaKnown RBP eCLIP18.79■□□□□ 0.6
GTF3A-202ENST00000419181 DEKP35659 375 aaKnown RBP18.79■□□□□ 0.6
GTF3A-202ENST00000419181 KRTCAP3Q53RY4 240 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 RTL4Q6ZR62 310 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 SLC29A4Q7RTT9 530 aa18.79■□□□□ 0.6
GTF3A-202ENST00000419181 TRIM46Q7Z4K8 759 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms