RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 GALNSP34059 522 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 CLNS1AP54105 237 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 STX1BP61266 288 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 AP2B1P63010 937 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 IRX1P78414 480 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 EXT1Q16394 746 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 CPTPQ5TA50 214 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 METTL21CQ5VZV1 264 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 NATD1Q8N6N6 113 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 OR14A16Q8NHC5 309 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 PPWD1Q96BP3 646 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 CNRIP1Q96F85 164 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 ZNF160Q9HCG1 818 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 ATP13A2Q9NQ11 1180 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 ATP6V1HQ9UI12 483 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 LAMA5O15230 3695 aa17.3■□□□□ 0.36
SEMA3B-202ENST00000418576 SAGE2PA6NJ88 616 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ARGFXA6NJG6 315 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 C17orf105B2RV13 164 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ATP1B1P05026 303 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 NTSP30990 170 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 PDCD4Q53EL6 469 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 C6orf163Q5TEZ5 329 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ANKRD26P1Q6NSI1 321 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 FAM180BQ6P0A1 224 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 RIMKLAQ8IXN7 391 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 CCDC116Q8IYX3 515 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 MIER2Q8N344 545 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 KRTCAP2Q8N6L1 136 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 RIT1Q92963 219 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 MARK4Q96L34 752 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ZNF681Q96N22 645 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ZBTB18Q99592 522 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 WDR77Q9BQA1 342 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 ING2Q9H160 280 aa17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 SDR39U1Q9NRG7 319 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-202ENST00000418576 PDPK1O15530 556 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 NCF2P19878 526 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 NME5P56597 212 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 SF3A3Q12874 501 aaKnown RBP eCLIP17.28■□□□□ 0.369e-7■□□□□ 10.7
SEMA3B-202ENST00000418576 AIMP2Q13155 320 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 CEBPEQ15744 281 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 DPY19L1Q2PZI1 675 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 BTBD16Q32M84 506 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ZNF750Q32MQ0 723 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 PTPMT1Q8WUK0 201 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 APOBEC4Q8WW27 367 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 IMMP1LQ96LU5 166 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ANKRD28O15084 1053 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 SLC22A3O75751 556 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 NT5EP21589 574 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 PGDP52209 483 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 SLC26A5P58743 744 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 CPZQ66K79 652 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 PLAG1Q6DJT9 500 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 SPATA21Q7Z572 469 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 GALNT12Q8IXK2 581 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 GLB1L3Q8NCI6 653 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 CCDC197Q8NCU1 140 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 MORN4Q8NDC4 146 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 B3GNT7Q8NFL0 401 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 OR7A2PQ8NGA2 310 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 TESCQ96BS2 214 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ZBED6CLQ96FA7 236 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ART5Q96L15 291 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ELAC2Q9BQ52 826 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 ZIM2Q9NZV7 527 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
SEMA3B-202ENST00000418576 A0A1W2PS29 197 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 MYO1GB0I1T2 1018 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 ANKRD65E5RJM6 399 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 NCBP2P52298 156 aaKnown RBP eCLIP17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 UFM1P61960 85 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 SRSF11Q05519 484 aaKnown RBP17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 PGS1Q32NB8 556 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 BORAQ6PGQ7 559 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 GPR155Q7Z3F1 870 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 CAMKMTQ7Z624 323 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 KBTBD2Q8IY47 623 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 ZFP28Q8NHY6 868 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 M1APQ8TC57 530 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 COQ8BQ96D53 544 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 BHLHE41Q9C0J9 482 aaPredicted RBP17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 CLMPQ9H6B4 373 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 MRGBPQ9NV56 204 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 COPS7AQ9UBW8 275 aa17.27■□□□□ 0.35
SEMA3B-202ENST00000418576 CFAP47Q6ZTR5 3102 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 LAMP1P11279 417 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 SPRED3Q2MJR0 410 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 IRAK1BP1Q5VVH5 260 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 APLFQ8IW19 511 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 VPS37AQ8NEZ2 397 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 DUSP26Q9BV47 211 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 OR8D2Q9GZM6 311 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 CXorf21Q9HAI6 301 aa17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 ACSS1Q9NUB1 689 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 PPIEQ9UNP9 301 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-202ENST00000418576 SNX3O60493 162 aa17.25■□□□□ 0.35
SEMA3B-202ENST00000418576 SLITRK5O94991 958 aa17.25■□□□□ 0.35
SEMA3B-202ENST00000418576 ITGB2P05107 769 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms