RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 LRFN1Q9P244 771 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 TMED5Q9Y3A6 229 aa17.22■□□□□ 0.35
CHTOP-202ENST00000368687 CROCCQ5TZA2 2017 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 FLNCQ14315 2725 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 TMEM114B3SHH9 223 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 PGRMC2O15173 223 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 ITGA10O75578 1167 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 IGKV3-11P04433 115 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 ATP1B1P05026 303 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 ANXA4P09525 319 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-202ENST00000368687 CPMP14384 443 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 CHN1P15882 459 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 CD96P40200 585 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 SSR4P51571 173 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 XKP51811 444 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 SLC18A1P54219 525 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 RNF4P78317 190 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 MPEG1Q2M385 716 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 CLEC6AQ6EIG7 209 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 SLC29A4Q7RTT9 530 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 DND1Q8IYX4 353 aaKnown RBP17.21■□□□□ 0.35
CHTOP-202ENST00000368687 CISD2Q8N5K1 135 aaKnown RBP17.21■□□□□ 0.35
CHTOP-202ENST00000368687 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 KLHL29Q96CT2 875 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 KCNK9Q9NPC2 374 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 C1orf109Q9NX04 203 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 ZNF223Q9UK11 482 aaPredicted RBP17.21■□□□□ 0.35
CHTOP-202ENST00000368687 DLGAP4Q9Y2H0 992 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 TRAF6Q9Y4K3 522 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 COL12A1Q99715 3063 aa17.21■□□□□ 0.35
CHTOP-202ENST00000368687 SLC25A12O75746 678 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 RASAL1O95294 804 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 SERPINE1P05121 402 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 DHRS4L1P0CG22 281 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 ALDH9A1P49189 494 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 RAE1P78406 368 aaKnown RBP17.2■□□□□ 0.34
CHTOP-202ENST00000368687 CASP8Q14790 479 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 SH2D4BQ5SQS7 431 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 RNF111Q6ZNA4 994 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 SLC15A4Q8N697 577 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 OR7G1Q8NGA0 311 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 OR6Y1Q8NGX8 325 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 ERP27Q96DN0 273 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 SCMH1Q96GD3 660 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 CNPPD1Q9BV87 410 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 CXorf21Q9HAI6 301 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 MYNNQ9NPC7 610 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 ASF1BQ9NVP2 202 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 UTS2RQ9UKP6 389 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 CES1P1Q9UKY3 287 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 CFL2Q9Y281 166 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 DNAJC15Q9Y5T4 150 aa17.2■□□□□ 0.34
CHTOP-202ENST00000368687 SEC22BO75396 215 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ERAL1O75616 437 aaKnown RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 NEURL1O76050 574 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 F10P00742 488 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 CHRNGP07510 517 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 IL3P08700 152 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 DDX5P17844 614 aaKnown RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 SERPINB3P29508 390 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ERVK-8P63133 956 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 BTKQ06187 659 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ZNF267Q14586 743 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 OPN5Q6U736 354 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 SCIMPQ6UWF3 145 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ZCCHC23Q6ZST2 131 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 CYP4Z2PQ8N1L4 340 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 LRRC25Q8N386 305 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 SLC22A8Q8TCC7 542 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 C16orf78Q8WTQ4 265 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 THAP3Q8WTV1 239 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 TWIST2Q8WVJ9 160 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 FAR1Q8WVX9 515 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ASB15Q8WXK1 588 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 PPWD1Q96BP3 646 aaKnown RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 LRTM1Q9HBL6 345 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 TNFRSF12AQ9NP84 129 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 MIEF1Q9NQG6 463 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 OLAHQ9NV23 265 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ERVK-19Q9WJR5 959 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ENTPD4Q9Y227 616 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 KLF13Q9Y2Y9 288 aaPredicted RBP17.19■□□□□ 0.34
CHTOP-202ENST00000368687 CCL27Q9Y4X3 112 aa17.19■□□□□ 0.34
CHTOP-202ENST00000368687 ESPL1Q14674 2120 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 MYOCOSA0A1B0GUC4 107 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 A8MVJ9 347 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 MAN1A2O60476 641 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 OR2J2O76002 312 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 SLITRK5O94991 958 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 HSPA4LO95757 839 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 SP1P08047 785 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 DDCP20711 480 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 NT5EP21589 574 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 MAPK1P28482 360 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 HK2P52789 917 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 FUT7Q11130 342 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 ELOAQ14241 798 aaKnown RBP17.18■□□□□ 0.34
CHTOP-202ENST00000368687 NR6A1Q15406 480 aa17.18■□□□□ 0.34
CHTOP-202ENST00000368687 PRR30Q53SZ7 412 aaPredicted RBP17.18■□□□□ 0.34
CHTOP-202ENST00000368687 HHATQ5VTY9 493 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms