RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PIN1Q13526 163 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 FBXL6Q8N531 539 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 TMEM145Q8NBT3 493 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 FCGR1BQ92637 280 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 FGF14Q92915 247 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 AMDHD1Q96NU7 426 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 WDR12Q9GZL7 423 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 MTIF3Q9H2K0 278 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SYNPO2LQ9H987 977 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 MRPS30Q9NP92 439 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SEMA3GQ9NS98 782 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 OBP2AQ9NY56 170 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SPHK1Q9NYA1 384 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 LMCD1Q9NZU5 365 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 DAPK2Q9UIK4 370 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 TMCC3Q9ULS5 477 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 B3GNT3Q9Y2A9 372 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 YBX2Q9Y2T7 364 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC31A1O15431 190 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 CBFA2T3O75081 653 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 NME6O75414 186 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 NR2F1P10589 423 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 ELAVL4P26378 380 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 PARM1Q6UWI2 310 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 WDR53Q7Z5U6 358 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 MFSD4AQ8N468 514 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC35G5Q96KT7 338 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 MAPKAP1Q9BPZ7 522 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 BTBD1Q9H0C5 482 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 OR51E2Q9H255 320 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 NT5DC2Q9H857 520 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC6A20Q9NP91 592 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 CTPS2Q9NRF8 586 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 OSGIN1Q9UJX0 560 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 FBXW2Q9UKT8 454 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 WBP11Q9Y2W2 641 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 TMEM247A6NEH6 219 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 LINC01565O15544 149 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 CLEC3AO75596 197 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 KCNJ5P48544 419 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 DUSP2Q05923 314 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ARMCX4Q5H9R4 360 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 DCST1Q5T197 706 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ZNF354BQ96LW1 612 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 BBS4Q96RK4 519 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 MYADMQ96S97 322 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 MVB12BQ9H7P6 319 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ANKRA2Q9H9E1 313 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC35C2Q9NQQ7 365 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 SCHIP1Q9P0W5 487 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ATG4BQ9Y4P1 393 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ATG2AQ2TAZ0 1938 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 FUOMA2VDF0 154 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 H3BN98 237 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ADH1BP00325 375 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 DBTP11182 482 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 PKLRP30613 574 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 SERPINB1P30740 379 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 RAB8AP61006 207 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 LSM11P83369 360 aaKnown RBP eCLIP17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 HYAL2Q12891 473 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 TRIM16LQ309B1 348 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 CCDC116Q8IYX3 515 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 MCFD2Q8NI22 146 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 OR5M11Q96RB7 305 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ZNF607Q96SK3 696 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 PSD2Q9BQI7 771 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ACSS1Q9NUB1 689 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 REV1Q9UBZ9 1251 aa17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-201ENST00000291842 A0A1W2PR48 441 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 PDE9AO76083 593 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 H1F0P07305 194 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 IGFALSP35858 605 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 ERVK-21P61565 698 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 DMPKQ09013 629 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 DOC2BQ14184 412 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC9A5Q14940 896 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 MED22Q15528 200 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 C18orf63Q68DL7 685 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC46A3Q7Z3Q1 461 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 BCDIN3DQ7Z5W3 292 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 UBE2Q1Q7Z7E8 422 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 CLIP4Q8N3C7 705 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 NATD1Q8N6N6 113 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 S100ZQ8WXG8 99 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC17A9Q9BYT1 436 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 UCK2Q9BZX2 261 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 QRSL1Q9H0R6 528 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 FBXO8Q9NRD0 319 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 P2RX2Q9UBL9 471 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 ADAM29Q9UKF5 820 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 RFXAPO00287 272 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 MAN2B1O00754 1011 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 ENTPD6O75354 484 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 GRK3P35626 688 aa17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 RPS21P63220 83 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 TARDBPQ13148 414 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHKBP1-201ENST00000291842 LASP1Q14847 261 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms