RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SLC38A9Q8NBW4 561 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 FAM13CQ8NE31 585 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ZFP28Q8NHY6 868 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 AURKBQ96GD4 344 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 OR1F2PQ96R84 312 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 BBS4Q96RK4 519 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 STRADBQ9C0K7 418 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CXorf36Q9H7Y0 433 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF304Q9HCX3 659 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 NEUROD4Q9HD90 331 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 SLC22A11Q9NSA0 550 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ADA2Q9NZK5 511 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF282Q9UDV7 671 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 NDOR1Q9UHB4 597 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 PCDHGB4Q9UN71 923 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 AP3M1Q9Y2T2 418 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 CLDN16Q9Y5I7 305 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 MAU2Q9Y6X3 613 aa13.86□□□□□ -0.19
SHKBP1-211ENST00000595945 PRORSD1PA6NEY8 169 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 TGFBR3LH3BV60 316 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 AGRPO00253 132 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 CTNSO60931 367 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 ANP32DO95626 131 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 C1QCP02747 245 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 FHP07954 510 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 C8orf89P0DMQ9 161 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 FBLP22087 321 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 IL10P22301 178 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 UQCRC2P22695 453 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 PPP2R1BP30154 601 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 RORAP35398 523 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 FEN1P39748 380 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 XCR1P46094 333 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 GZMMP51124 257 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 NCBP2P52298 156 aaKnown RBP eCLIP13.85□□□□□ -0.194e-7■□□□□ 8.2
SHKBP1-211ENST00000595945 CLDN6P56747 220 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 MTPNP58546 118 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 FOLH1Q04609 750 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 FXNQ16595 210 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 CALHM3Q86XJ0 350 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 ZC3H7AQ8IWR0 971 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 CACTIN-AS1Q8N1I8 211 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 TBC1D20Q96BZ9 403 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 SH3GL1Q99961 368 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 DPH2Q9BQC3 489 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 KAT8Q9H7Z6 458 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 TPT1P8Q9HAU6 139 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 AKAP7Q9P0M2 348 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 GMPR2Q9P2T1 348 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 CLCA2Q9UQC9 943 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 L3MBTL1Q9Y468 752 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 LOXL2Q9Y4K0 774 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF780BQ9Y6R6 833 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 SDK2Q58EX2 2172 aa13.85□□□□□ -0.19
SHKBP1-211ENST00000595945 IGLV3-12A0A075B6K2 115 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 CLIC1O00299 241 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 LDB3O75112 727 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 ABCB1P08183 1280 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 IFI6P09912 130 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 PORP16435 677 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 GPX2P18283 190 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 PPIBP23284 216 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 ME2P23368 584 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 MPIP34949 423 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 SOX18P35713 384 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 ETV5P41161 510 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 GSK3BP49841 420 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 MVDP53602 400 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 HSD17B7P56937 341 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 LIPEQ05469 1076 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 HSPB3Q12988 150 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 HES3Q5TGS1 186 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 DHRS13Q6UX07 377 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 TMEM64Q6YI46 380 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 OR4N5Q8IXE1 308 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 CCDC116Q8IYX3 515 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 LRRC25Q8N386 305 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 TRIML2Q8N7C3 387 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 RNF148Q8N7C7 305 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 SFXN5Q8TD22 340 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 PMEPA1Q969W9 287 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 COL26A1Q96A83 441 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 ZNF583Q96ND8 569 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 DEPDC7Q96QD5 511 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 CMKLR1Q99788 373 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 CTRCQ99895 268 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 RBCK1Q9BYM8 510 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 MKKSQ9NPJ1 570 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 PRTFDC1Q9NRG1 225 aa13.84□□□□□ -0.19
SHKBP1-211ENST00000595945 SLC39A1Q9NY26 324 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms