RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 EXT2Q93063 718 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 SECISBP2LQ93073 1101 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 PIWIL1Q96J94 861 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 AK8Q96MA6 479 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 NUDT16L1Q9BRJ7 211 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 C19orf24Q9BVV8 132 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 GTPBP2Q9BX10 602 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 VCXQ9H320 206 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 S100A14Q9HCY8 104 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 MFSD2BA6NFX1 497 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 CCDC188H7C350 402 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 SPRY1O43609 319 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 NUDT21O43809 227 aaKnown RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 AHCYL1O43865 530 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 PSMD10O75832 226 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 ERCC2P18074 760 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 ZP3P21754 424 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 CALML3P27482 149 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 XCR1P46094 333 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 CRKLP46109 303 aaKnown RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 RGS7P49802 495 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 MFAP3P55082 362 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 MSLNQ13421 630 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 UGCGQ16739 394 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 NHSL2Q5HYW2 709 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 LRRC73Q5JTD7 316 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 IGFL1Q6UW32 110 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 TFAP2EQ6VUC0 442 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF730Q6ZMV8 503 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 NRARPQ7Z6K4 114 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 SYVN1Q86TM6 617 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 PI4KAP1Q8N8J0 262 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 SNRNP40Q96DI7 357 aaKnown RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 BPIFA2Q96DR5 249 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 LINC00615Q96LM1 132 aaPredicted RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF558Q96NG5 402 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 SLC25A23Q9BV35 468 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 UBA5Q9GZZ9 404 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 GLT8D2Q9H1C3 349 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 MTIF3Q9H2K0 278 aaKnown RBP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 UBQLN3Q9H347 655 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 BCCIPQ9P287 314 aaKnown RBP eCLIP1.29□□□□□ -2.2
CCDC93-209ENST00000488908 DPM3Q9P2X0 92 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 SNX7Q9UNH6 387 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 HEG1Q9ULI3 1381 aa1.29□□□□□ -2.2
CCDC93-209ENST00000488908 A0A1B0GUA9 196 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 PRAF2O60831 178 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 SPP1P10451 314 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 KRT3P12035 628 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CPT2P23786 658 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 EEF1DP29692 281 aaKnown RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CDX1P47902 265 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 FHITP49789 147 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 RPS8P62241 208 aaKnown RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 IFI35P80217 286 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 AIMP1Q12904 312 aaKnown RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 SERTAD2Q14140 314 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 EMC2Q15006 297 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 TCP11X2Q5H9J9 407 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CYB5R2Q6BCY4 276 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 C11orf57Q6ZUT1 292 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CHST3Q7LGC8 479 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 PLPPR4Q7Z2D5 763 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 APCDD1Q8J025 514 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 OR1K1Q8NGR3 316 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CRYGNQ8WXF5 182 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 PGAP3Q96FM1 320 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF274Q96GC6 653 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 CCM2Q9BSQ5 444 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 VIPAS39Q9H9C1 493 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 IL1RL2Q9HB29 575 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 MIEF1Q9NQG6 463 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF223Q9UK11 482 aaPredicted RBP1.28□□□□□ -2.2
CCDC93-209ENST00000488908 KLK4Q9Y5K2 254 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 FLVCR1Q9Y5Y0 555 aa1.28□□□□□ -2.2
CCDC93-209ENST00000488908 SLIT3O75094 1523 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 TRABD2BA6NFA1 517 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 PGLSO95336 258 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 GGPS1O95749 300 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 MOCS2O96007 188 aaPredicted RBP1.27□□□□□ -2.21
CCDC93-209ENST00000488908 PDGFRAP16234 1089 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 TBPP20226 339 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 IL11P20809 199 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 IL2RGP31785 369 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 SLC26A2P50443 739 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 MFAP2P55001 183 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 MZT1Q08AG7 82 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 CEACAM7Q14002 265 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 SLC17A1Q14916 467 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 GPNMBQ14956 572 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 LY6EQ16553 131 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 SPATA46Q5T0L3 261 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 WDR25Q64LD2 544 aaPredicted RBP1.27□□□□□ -2.21
CCDC93-209ENST00000488908 KRT74Q7RTS7 529 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 ADCK2Q7Z695 626 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 CERS3Q8IU89 383 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 TMEM99Q8N816 258 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 NCOA7Q8NI08 942 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 MARCH1Q8TCQ1 289 aa1.27□□□□□ -2.21
CCDC93-209ENST00000488908 TFB1MQ8WVM0 346 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms