RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 DAG1Q14118 895 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 FASTKQ14296 549 aaKnown RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 PTPRNQ16849 979 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 COL28A1Q2UY09 1125 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 ZNF667Q5HYK9 610 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 SYT6Q5T7P8 510 aaPredicted RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 ZNF776Q68DI1 518 aaPredicted RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 HEATR6Q6AI08 1181 aaKnown RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 SLC9B2Q86UD5 537 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 PSTKQ8IV42 348 aaKnown RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 RBFAQ8N0V3 343 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 ARFGAP1Q8N6T3 406 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 EMC1Q8N766 993 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 WDSUB1Q8N9V3 476 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 ZNF540Q8NDQ6 660 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 OR11H4Q8NGC9 324 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 KIAA1191Q96A73 305 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 SLC22A18Q96BI1 424 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 AP2M1Q96CW1 435 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 C11orf24Q96F05 449 aaPredicted RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 CSPG4P5Q96PW8 444 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 SLC30A3Q99726 388 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 DPYSL5Q9BPU6 564 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 SOX7Q9BT81 388 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 TGIF2Q9GZN2 237 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 VSX1Q9NZR4 365 aaPredicted RBP5.61□□□□□ -1.51
CLK1-207ENST00000461981 NLKQ9UBE8 527 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 CACNG4Q9UBN1 327 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 RNF6Q9Y252 685 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 CCL26Q9Y258 94 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 FAM186AA6NE01 2351 aa5.61□□□□□ -1.51
CLK1-207ENST00000461981 ANKDD1BA6NHY2 528 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 HHLA1C9JL84 531 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 NME4O00746 187 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 FFAR3O14843 346 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 GPR42O15529 346 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 COCHO43405 550 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PROSCO94903 275 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 GADD45GO95257 159 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 C1QAP02745 245 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 LTFP02788 710 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 CYP4B1P13584 511 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 HLA-EP13747 358 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 TSPAN8P19075 237 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 CPN2P22792 545 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 CYP2F1P24903 491 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PTBP1P26599 531 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLK1-207ENST00000461981 GRK5P34947 590 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SOX6P35712 828 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SCNN1AP37088 669 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 GNALP38405 381 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PSMD4P55036 377 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 YBX1P67809 324 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 CRYZQ08257 329 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 CDH18Q13634 790 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 COL9A2Q14055 689 aaPredicted RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 CLINT1Q14677 625 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 GANABQ14697 944 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 MICAQ29983 383 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 EIF2S3LQ2VIR3 472 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 TTC23Q5W5X9 447 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 RAET1GQ6H3X3 334 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 NLRC3Q7RTR2 1065 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PIWIL4Q7Z3Z4 852 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 CMC1Q7Z7K0 106 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SLC41A1Q8IVJ1 513 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 KATNAL2Q8IYT4 538 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 LRRC17Q8N6Y2 441 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 ACTL9Q8TC94 416 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 TMBIM1Q969X1 311 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PCED1BQ96HM7 432 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 BBS4Q96RK4 519 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SLC29A3Q9BZD2 475 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 OR51E2Q9H255 320 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 UNKLQ9H9P5 680 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 ACOT13Q9NPJ3 140 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 HSPBP1Q9NZL4 362 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 DHRS7Q9Y394 339 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 E9PI62 339 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SLC16A3O15427 465 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 RGS11O94810 467 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 C4BPAP04003 597 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 PRKCGP05129 697 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 ITGAVP06756 1048 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 LPLP06858 475 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 ZNF37AP17032 561 aaPredicted RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 ZNF8P17098 575 aaPredicted RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 JUNDP17535 347 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 NDUFV2P19404 249 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 TFEBP19484 476 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 PVALBP20472 110 aaPredicted RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 PSMD8P48556 350 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 RPL14P50914 215 aaKnown RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 BCAT1P54687 386 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 ACTR1AP61163 376 aa5.6□□□□□ -1.51
CLK1-207ENST00000461981 SIM1P81133 766 aaPredicted RBP5.6□□□□□ -1.51
CLK1-207ENST00000461981 TAF10Q12962 218 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms