RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
SNU13-204ENST00000402458 AIG1Q9NVV5 245 aa12.77□□□□□ -0.37
SNU13-204ENST00000402458 HEY2Q9UBP5 337 aa12.77□□□□□ -0.37
SNU13-204ENST00000402458 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
SNU13-204ENST00000402458 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.37
SNU13-204ENST00000402458 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 A8MUA0 341 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 E9PBE3 544 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 KLHL41O60662 606 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 HPP00738 406 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 FURINP09958 794 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 SLC35E2P0CK97 266 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 ICAM2P13598 275 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 NTSP30990 170 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 STT3AP46977 705 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 EFNA3P52797 238 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 DIO3P55073 304 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 CLDN8P56748 225 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 PTGR1Q14914 329 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 ELAVL1Q15717 326 aaKnown RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 ST3GAL2Q16842 350 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 PAPD4Q6PIY7 484 aaKnown RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 RIPOR1Q6ZS17 1223 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 NATD1Q8N6N6 113 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 TMEM102Q8N9M5 508 aaPredicted RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 CLEC1AQ8NC01 280 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 UCN3Q969E3 161 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 TUBB6Q9BUF5 446 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 TMEM120AQ9BXJ8 343 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 FAM107BQ9H098 131 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 SLC35C2Q9NQQ7 365 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 C5AR2Q9P296 337 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 KLHL14Q9P2G3 628 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 CES1P1Q9UKY3 287 aa12.76□□□□□ -0.37
SNU13-204ENST00000402458 G3BP2Q9UN86 482 aaKnown RBP12.76□□□□□ -0.37
SNU13-204ENST00000402458 IGHV3-20A0A0C4DH32 117 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 MYOCOSA0A1B0GUC4 107 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 A0A1W2PQ72 361 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 WASHC1A8K0Z3 465 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 TBX19O60806 448 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 SEC24DO94855 1032 aaPredicted RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 COX6A1P12074 109 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 CPMP14384 443 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 NT5EP21589 574 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 GALNSP34059 522 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 MPIP34949 423 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 FEN1P39748 380 aaKnown RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 SEC24CP53992 1094 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 TERF2Q15554 542 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 EXT1Q16394 746 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 CPTPQ5TA50 214 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 IRAK1BP1Q5VVH5 260 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 MIER2Q8N344 545 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 LRRC25Q8N386 305 aaPredicted RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 OR14A16Q8NHC5 309 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 ZNF764Q96H86 408 aaPredicted RBP12.75□□□□□ -0.37
SNU13-204ENST00000402458 ART5Q96L15 291 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 MARK4Q96L34 752 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 ZNF160Q9HCG1 818 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 ATP13A2Q9NQ11 1180 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 MRGBPQ9NV56 204 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 TAS2R7Q9NYW3 318 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 ATP6V1HQ9UI12 483 aa12.75□□□□□ -0.37
SNU13-204ENST00000402458 IGF2RP11717 2491 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 CFAP47Q6ZTR5 3102 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 SAGE2PA6NJ88 616 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 ARGFXA6NJG6 315 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 GABRR3A8MPY1 467 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 C17orf105B2RV13 164 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 PDPK1O15530 556 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 NCF2P19878 526 aaPredicted RBP12.74□□□□□ -0.37
SNU13-204ENST00000402458 PGDP52209 483 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 NME5P56597 212 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 C21orf58P58505 322 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 SRSF11Q05519 484 aaKnown RBP12.74□□□□□ -0.37
SNU13-204ENST00000402458 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNU13-204ENST00000402458 AIMP2Q13155 320 aaKnown RBP12.74□□□□□ -0.37
SNU13-204ENST00000402458 PDE7AQ13946 482 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 PCOLCEQ15113 449 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 DPY19L1Q2PZI1 675 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 PDCD4Q53EL6 469 aaKnown RBP12.74□□□□□ -0.37
SNU13-204ENST00000402458 DCAF10Q5QP82 559 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 ANKRD26P1Q6NSI1 321 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 CGB2Q6NT52 195 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 SPATA21Q7Z572 469 aa12.74□□□□□ -0.37
SNU13-204ENST00000402458 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms