RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 RHOXF1Q8NHV9 184 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 CD93Q9NPY3 652 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 HCN4Q9Y3Q4 1203 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 TSC22D4Q9Y3Q8 395 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 PMF1-BGLAPU3KQ54 211 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 MDC1Q14676 2089 aaKnown RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 PGRMC2O15173 223 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 SEMA3DO95025 777 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 TRIM23P36406 574 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 RXRGP48443 463 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 CLDN2P57739 230 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 RAB8AP61006 207 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 PRDX1Q06830 199 aaKnown RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 SEC23BQ15437 767 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 SHHQ15465 462 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 GPR19Q15760 415 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 DNAJC22Q8N4W6 341 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 CREB3L4Q8TEY5 395 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 SH3YL1Q96HL8 342 aaPredicted RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 FCRL4Q96PJ5 515 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 OR51I1Q9H343 314 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 GLIPR2Q9H4G4 154 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 MS4A12Q9NXJ0 267 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 PSORS1C1Q9UIG5 152 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 ACSL5Q9ULC5 683 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 SCN2AQ99250 2005 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 LRIT2A6NDA9 550 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 ERI3O43414 337 aaKnown RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 ADRA2AP08913 450 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 C5AR1P21730 350 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 IGFALSP35858 605 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 TGFBR2P37173 567 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 RAB28P51157 221 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 NCBP2P52298 156 aaKnown RBP eCLIP17.68■□□□□ 0.42
RNF139-201ENST00000303545 SOWAHCQ53LP3 525 aaPredicted RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 TMEM31Q5JXX7 168 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 RNF167Q9H6Y7 350 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 TRPV4Q9HBA0 871 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 ZBTB20Q9HC78 741 aaPredicted RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 SLC6A20Q9NP91 592 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 MRPS30Q9NP92 439 aaKnown RBP17.68■□□□□ 0.42
RNF139-201ENST00000303545 CCNB1IP1Q9NPC3 277 aa17.68■□□□□ 0.42
RNF139-201ENST00000303545 K7EQS6 105 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 MFN2O95140 757 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 HSMCR30P0CW71 290 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 RHCEP18577 417 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 DUSP2Q05923 314 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 SYCE2Q6PIF2 218 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 ADCK1Q86TW2 530 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 IPCEF1Q8WWN9 437 aaPredicted RBP17.67■□□□□ 0.42
RNF139-201ENST00000303545 IL4I1Q96RQ9 567 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
RNF139-201ENST00000303545 M0R3H8 397 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 RNGTTO60942 597 aaKnown RBP17.67■□□□□ 0.42
RNF139-201ENST00000303545 EML2O95834 649 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 LIMS1P48059 325 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 SLAMF1Q13291 335 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 Q6ZNX1 250 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 MEX3DQ86XN8 651 aaKnown RBP17.67■□□□□ 0.42
RNF139-201ENST00000303545 ZBED6CLQ96FA7 236 aaPredicted RBP17.67■□□□□ 0.42
RNF139-201ENST00000303545 BTBD1Q9H0C5 482 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 PCBD2Q9H0N5 130 aa17.67■□□□□ 0.42
RNF139-201ENST00000303545 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 H0Y8X5 98 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 M0R082 166 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 ADH1BP00325 375 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 CHMP24386 653 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 CNR2P34972 360 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 HSD17B2P37059 387 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 LSM11P83369 360 aaKnown RBP eCLIP17.66■□□□□ 0.42
RNF139-201ENST00000303545 ST3GAL4Q11206 333 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 C18orf63Q68DL7 685 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 WDR53Q7Z5U6 358 aaPredicted RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 CCDC116Q8IYX3 515 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 STX19Q8N4C7 294 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 LGALS12Q96DT0 336 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 FAM210AQ96ND0 272 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 SIGLEC11Q96RL6 698 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 QRSL1Q9H0R6 528 aaKnown RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 ZCCHC3Q9NUD5 404 aaKnown RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 SEC14L3Q9UDX4 400 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 ATG4BQ9Y4P1 393 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 A0A0A6YYD5 115 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 CBLP22681 906 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 AK4P27144 223 aaPredicted RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 PEBP1P30086 187 aaKnown RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 PPP2CBP62714 309 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 SNRPNP63162 240 aaKnown RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 PPP2CAP67775 309 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 PIN1Q13526 163 aaPredicted RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 ITPRIPL2Q3MIP1 535 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 PERM1Q5SV97 790 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 KIAA1161Q6NSJ0 714 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 RAB42Q8N4Z0 105 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 QRFPRQ96P65 431 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 BBS4Q96RK4 519 aa17.66■□□□□ 0.42
RNF139-201ENST00000303545 TREX2Q9BQ50 279 aaPredicted RBP17.66■□□□□ 0.42
RNF139-201ENST00000303545 PRR14Q9BWN1 585 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms