RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 LACC1Q8IV20 430 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 DEPDC4Q8N2C3 294 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 B3GNT7Q8NFL0 401 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 RPP25Q9BUL9 199 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 ROGDIQ9GZN7 287 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 GLIPR2Q9H4G4 154 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 RNF167Q9H6Y7 350 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 KCNK12Q9HB15 430 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 PALMDQ9NP74 551 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 C11orf16Q9NQ32 467 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 TRPC4Q9UBN4 977 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 ACSL5Q9ULC5 683 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
SHKBP1-201ENST00000291842 C4orf51C9J302 202 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 AIREO43918 545 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 TPST2O60704 377 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 ADRA2AP08913 450 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 BMP4P12644 408 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 TRIM23P36406 574 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 BCL6P41182 706 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 ZNF770Q6IQ21 691 aaPredicted RBP17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 TCTN3Q6NUS6 607 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 ZNF554Q86TJ5 538 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 DENND6BQ8NEG7 585 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 ZNF675Q8TD23 568 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 CREB3L4Q8TEY5 395 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 VMP1Q96GC9 406 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 IL4I1Q96RQ9 567 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 FKBP14Q9NWM8 211 aa17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 DNMT3AQ9Y6K1 912 aaPredicted RBP17.39■□□□□ 0.38
SHKBP1-201ENST00000291842 LRIT2A6NDA9 550 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 PDZK1P1A8MUH7 402 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 ERAL1O75616 437 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 GDI1P31150 447 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 GRK5P34947 590 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 TBCEQ15813 527 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 INAQ16352 499 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 COMTD1Q86VU5 262 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 SLC30A8Q8IWU4 369 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 OR8K5Q8NH50 307 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 OR14C36Q8NHC7 312 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 CHPT1Q8WUD6 406 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 TREX2Q9BQ50 279 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 SLIRPQ9GZT3 109 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 OR51I1Q9H343 314 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 DDX31Q9H8H2 851 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 PHPT1Q9NRX4 125 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 DNAAF2Q9NVR5 837 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 SEC14L3Q9UDX4 400 aa17.39■□□□□ 0.37
SHKBP1-201ENST00000291842 LOC100506127A0A0U1RQW1 187 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 CLDN24A6NM45 220 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 APODP05090 189 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 ADORA3P0DMS8 318 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 PBX2P40425 430 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 FRKP42685 505 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 SERPINB10P48595 397 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 RAB28P51157 221 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 CRISP1P54107 249 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 CDC42P60953 191 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 SGCGQ13326 291 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 GPR19Q15760 415 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 MLIPQ5VWP3 458 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 FRMPD2BQ6IN97 320 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 KIAA1161Q6NSJ0 714 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 PTCHD4Q6ZW05 846 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 MKRN2Q9H000 416 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 DCSTAMPQ9H295 470 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 FTSJ1Q9UET6 329 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 KCND3Q9UK17 655 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 SNRNP200O75643 2136 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 A0A0A6YYD5 115 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 A0A1W2PS29 197 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 BOLA2-SMG1P6H3BVE0 249 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 HAT1O14929 419 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 PGRMC2O15173 223 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 OR10H3O60404 316 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 CEACAM5P06731 702 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 C8orf89P0DMQ9 161 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 NCBP2P52298 156 aaKnown RBP eCLIP17.38■□□□□ 0.374e-7■□□□□ 8.2
SHKBP1-201ENST00000291842 IFITM3Q01628 133 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 UAP1L1Q3KQV9 507 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 CACTIN-AS1Q8N1I8 211 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 RAB42Q8N4Z0 105 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 OR52E1Q8NGJ3 308 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 OR6Q1Q8NGQ2 317 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 TRPV4Q9HBA0 871 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 ZCCHC3Q9NUD5 404 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 TBCCD1Q9NVR7 557 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 FBXL12Q9NXK8 326 aa17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 SPTBN5Q9NRC6 3674 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-201ENST00000291842 A0A1W2PQU0 124 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 ZAR1LA6NP61 321 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 A8MVJ9 347 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 M0R3H8 397 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 ERI3O43414 337 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 TBX19O60806 448 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 C5AR1P21730 350 aa17.37■□□□□ 0.37
SHKBP1-201ENST00000291842 SLAMF1Q13291 335 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms