RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 C7orf57Q8NEG2 295 aa16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 GRHL3Q8TE85 626 aa16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 BARD1Q99728 777 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 HES7Q9BYE0 225 aa16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 KLHL1Q9NR64 748 aa16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 PCDHA9Q9Y5H5 950 aa16.71■□□□□ 0.27
SNRPA1-201ENST00000254193 CNTRLQ7Z7A1 2325 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 SERTM1A2A2V5 107 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 TMEM200CA6NKL6 621 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 GUCY1B2O75343 617 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ERLIN1O75477 346 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 CHRNGP07510 517 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 SLC35E2P0CK97 266 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 UROSP10746 265 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 PIK3R1P27986 724 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ACSM2AQ08AH3 577 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 NR6A1Q15406 480 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ZNF750Q32MQ0 723 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ACSM2BQ68CK6 577 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 RPUSD3Q6P087 351 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ZCCHC23Q6ZST2 131 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 EXOC3L1Q86VI1 746 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 OR4K14Q8NGD5 310 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 ZNF721Q8TF20 911 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 RIT1Q92963 219 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 TRMOQ9BU70 441 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 LRFN1Q9P244 771 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 MCM8Q9UJA3 840 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 FIS1Q9Y3D6 152 aa16.7■□□□□ 0.26
SNRPA1-201ENST00000254193 GNG14A0A1W2PPG7 69 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 C1orf226A1L170 272 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 WWP2O00308 870 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 FCHO1O14526 889 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 CTIFO43310 598 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 DYRK3O43781 588 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 PCDH7O60245 1069 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 ITGA10O75578 1167 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 OR2J2O76002 312 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 NEURL1O76050 574 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 IGKV3-11P04433 115 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 BPGMP07738 259 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 TRHRP34981 398 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 ETV4P43268 484 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 CYB561P49447 251 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 HLCSP50747 726 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 XKP51811 444 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 RNF4P78317 190 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 SRSF11Q05519 484 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 ZNF267Q14586 743 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 ARL13AQ5H913 290 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 SLC48A1Q6P1K1 146 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 FAM180AQ6UWF9 173 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 LRIG3Q6UXM1 1119 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 TRIM46Q7Z4K8 759 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 ZNF227Q86WZ6 799 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 FBXL20Q96IG2 436 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 PELOQ9BRX2 385 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 EBPLQ9BY08 206 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 AGPAT4Q9NRZ5 378 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 MYOTQ9UBF9 498 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 COPS7AQ9UBW8 275 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 CES1P1Q9UKY3 287 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 PTGDR2Q9Y5Y4 395 aa16.69■□□□□ 0.26
SNRPA1-201ENST00000254193 BAHCC1Q9P281 2608 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 AZIN1O14977 448 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 NPHS1O60500 1241 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 CD46P15529 392 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 TIA1P31483 386 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 ALDH9A1P49189 494 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 TRA2BP62995 288 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 ERVK-8P63133 956 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 PMP22Q01453 160 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 IMPG1Q17R60 797 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 TNFAIP8L3Q5GJ75 292 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 BEND6Q5SZJ8 279 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 TMEM156Q8N614 296 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 HORMAD2Q8N7B1 307 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 C16orf78Q8WTQ4 265 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 FAR1Q8WVX9 515 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 C11orf24Q96F05 449 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 FAIM2Q9BWQ8 316 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 TRIM45Q9H8W5 580 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 HEY2Q9UBP5 337 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 ERVK-19Q9WJR5 959 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 DLGAP4Q9Y2H0 992 aa16.68■□□□□ 0.26
SNRPA1-201ENST00000254193 SCN2AQ99250 2005 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 TMEM233B4DJY2 109 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 ERAL1O75616 437 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 SLC25A12O75746 678 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 RASAL1O95294 804 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 CBX6O95503 412 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 SP1P08047 785 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 IL3P08700 152 aa16.67■□□□□ 0.26
SNRPA1-201ENST00000254193 ANXA4P09525 319 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms