RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 GSTK1Q9Y2Q3 226 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 LINC00862A6NCI5 91 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 PRR23AA6NEV1 266 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 FAAHO00519 579 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 SLC30A4O14863 429 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 COCHO43405 550 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 ETHE1O95571 254 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 ARSBP15848 533 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 APEX1P27695 318 aaKnown RBP16.77■□□□□ 0.27
RAB40C-205ENST00000539661 HLA-FP30511 346 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 UQCRC1P31930 480 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 DUSP4Q13115 394 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 QSOX2Q6ZRP7 698 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 VRK3Q8IV63 474 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 IQCF2Q8IXL9 164 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 KCNJ15Q99712 375 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 C12orf10Q9HB07 376 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.27
RAB40C-205ENST00000539661 RAB23Q9ULC3 237 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 PCDHB7Q9Y5E2 793 aa16.77■□□□□ 0.27
RAB40C-205ENST00000539661 TRBV4-1A0A0J9YWV2 114 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 WASHC1A8K0Z3 465 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 HEPACAM2A8MVW5 462 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 E7EQ34 232 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 SGK494L7N484 410 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 GPR37L1O60883 481 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 DUSP11O75319 330 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 C6orf47O95873 294 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 AKR1A1P14550 325 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 POLR2CP19387 275 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 FGF9P31371 208 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 SSTR4P31391 388 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 TPBGQ13641 420 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 C3orf38Q5JPI3 329 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 CLLU1OSQ5K130 101 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 PAQR6Q6TCH4 344 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 KLHDC8AQ8IYD2 350 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 DCAF4L2Q8NA75 395 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 OR52I1Q8NGK6 324 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 AKAP1Q92667 903 aaKnown RBP eCLIP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 UPRTQ96BW1 309 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 DCLRE1CQ96SD1 692 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 TMEM43Q9BTV4 400 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 MCUBQ9NWR8 336 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 RHCGQ9UBD6 479 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 EIF3KQ9UBQ5 218 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 STOML2Q9UJZ1 356 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 FFAR1O14842 300 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 ELNP15502 786 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 DDX5P17844 614 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 CASP9P55211 416 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 WNT4P56705 351 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 SNRPD2P62316 118 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 ABATP80404 500 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 ZNF763Q0D2J5 394 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 ZBTB37Q5TC79 503 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 CNIH2Q6PI25 160 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 PDZD3Q86UT5 571 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 FAM20CQ8IXL6 584 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 TCEANCQ8N8B7 351 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 OR4K1Q8NGD4 311 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 OR6K2Q8NGY2 324 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.76■□□□□ 0.279e-13■■■■■ 40.9
RAB40C-205ENST00000539661 APOBEC4Q8WW27 367 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 TEFMQ96QE5 360 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 WRAP53Q9BUR4 548 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 HDHD5Q9BXW7 423 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 POLDIP3Q9BY77 421 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 NLKQ9UBE8 527 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 TESQ9UGI8 421 aaKnown RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 ASB4Q9Y574 426 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 SPIN1Q9Y657 262 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-205ENST00000539661 AUP1Q9Y679 476 aa16.76■□□□□ 0.27
RAB40C-205ENST00000539661 IRGMA1A4Y4 181 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ZNF840PA6NDX5 716 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 OR5K3A6NET4 321 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 H3BN98 237 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 GAAP10253 952 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 NR2F6P10588 404 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ZNF8P17098 575 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CHI3L1P36222 383 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 FEN1P39748 380 aaKnown RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 PNLIPRP1P54315 467 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ALDH6A1Q02252 535 aaKnown RBP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 PDE7AQ13946 482 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 ATP13A5Q4VNC0 1218 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 KLHL22Q53GT1 634 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 DCST1Q5T197 706 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CEACAM20Q6UY09 585 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40C-205ENST00000539661 C9orf62Q8N4C0 152 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 NATD1Q8N6N6 113 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 LSMEM1Q8N8F7 131 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CREB3L1Q96BA8 519 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■■■■□ 21.9
RAB40C-205ENST00000539661 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
RAB40C-205ENST00000539661 SF3B6Q9Y3B4 125 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms