RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FCGR3BO75015 233 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 B3GAT3O94766 335 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 CSN3P07498 182 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 CELA2AP08217 269 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 PRKAR1AP10644 381 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SSTR2P30874 369 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ACVRL1P37023 503 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 RPL21P46778 160 aaKnown RBP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 NPBWR1P48145 328 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAPK12P53778 367 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 KRTAP10-9P60411 292 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 HNRNPKP61978 463 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ILF2Q12905 390 aaKnown RBP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRAF1Q13077 416 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 HNF4GQ14541 408 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNF234Q14588 700 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SRSF7Q16629 238 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC39A12Q504Y0 691 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 LRRC38Q5VT99 294 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM69BQ5VUD6 431 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC8B1Q6J4K2 584 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC27A1Q6PCB7 646 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 BIVMQ86UB2 503 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ITIH5Q86UX2 942 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 NANOGP1Q8N7R0 232 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ACVR1CQ8NER5 493 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR5R1Q8NH85 324 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 CKAP2Q8WWK9 683 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 WASF1Q92558 559 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 RIT1Q92963 219 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 PHF21AQ96BD5 680 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 C5orf30Q96GV9 206 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 PGLYRP2Q96PD5 576 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 PRRG4Q9BZD6 226 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 DCLK3Q9C098 648 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 MIS12Q9H081 205 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 ABCG8Q9H221 673 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SNX25Q9H3E2 840 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 BOLA2Q9H3K6 86 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 SRD5A3Q9H8P0 318 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 FKRPQ9H9S5 495 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 MAD2L2Q9UI95 211 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 AKAP6Q13023 2319 aa4.37□□□□□ -1.71
HMGB1P23-201ENST00000518743 HIVEP2P31629 2446 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRAV24A0A0B4J272 114 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ILVBLA1L0T0 632 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SYCE3A1L190 88 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 HYKKA2RU49 373 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC9B1P1A6NJY1 282 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 MKRN2OSH3BPM6 223 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 CACNB4O00305 520 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZBTB5O15062 677 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 GPAA1O43292 621 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 RGS14O43566 566 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR10H2O60403 315 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SELENOFO60613 162 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 KCNJ13O60928 360 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 FAM106CPP0CH98 169 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 IRF2P14316 349 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 VCLP18206 1134 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 S1PR1P21453 382 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 OXTRP30559 389 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 CDX1P47902 265 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 PGGT1BP53609 377 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 RPS18P62269 152 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 COL10A1Q03692 680 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 GPS2Q13227 327 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 DRP2Q13474 957 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 NPTX1Q15818 432 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SETMARQ53H47 684 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 VWA2Q5GFL6 755 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ELFN2Q5R3F8 820 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ADCK1Q86TW2 530 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNF410Q86VK4 478 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 DCP1BQ8IZD4 617 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 UXS1Q8NBZ7 420 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 OR52I2Q8NH67 350 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC38A5Q8WUX1 472 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 APOBEC4Q8WW27 367 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SLC44A1Q8WWI5 657 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 BCL2L2Q92843 193 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 ST6GALNAC6Q969X2 333 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SGK494Q96LW2 274 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 CATSPER2Q96P56 530 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 RUFY1Q96T51 708 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 NAP1L3Q99457 506 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SMR3AQ99954 134 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 C1QTNF7Q9BXJ2 289 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 CACNG6Q9BXT2 260 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 SPRY4Q9C004 299 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 XPO4Q9C0E2 1151 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 NXF3Q9H4D5 531 aaKnown RBP4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 LY9Q9HBG7 655 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 TRPC7Q9HCX4 862 aa4.36□□□□□ -1.71
HMGB1P23-201ENST00000518743 GDF3Q9NR23 364 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms