RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 NME5P56597 212 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 OR4D2P58180 307 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 CDC20Q12834 499 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 PTGR1Q14914 329 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 UGT8Q16880 541 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 FAM71E1Q6IPT2 247 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 OGFOD2Q6N063 350 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 CGB2Q6NT52 195 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 CPLX4Q7Z7G2 160 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 MRGPREQ86SM8 312 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 SCUBE1Q8IWY4 988 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 PARP9Q8IXQ6 854 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 KDF1Q8NAX2 398 aaPredicted RBP14.05□□□□□ -0.16
NUP54-213ENST00000513352 PLPP5Q8NEB5 264 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 DNAJB14Q8TBM8 379 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 MAELQ96JY0 434 aaKnown RBP14.05□□□□□ -0.16
NUP54-213ENST00000513352 CATSPER2Q96P56 530 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 SIKE1Q9BRV8 207 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 ALOXE3Q9BYJ1 711 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 RABEP2Q9H5N1 569 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 CPNE5Q9HCH3 593 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 PNO1Q9NRX1 252 aaKnown RBP14.05□□□□□ -0.16
NUP54-213ENST00000513352 GIMAP4Q9NUV9 329 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 HEY2Q9UBP5 337 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 UTS2RQ9UKP6 389 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 PSME2Q9UL46 239 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 HS3ST3B1Q9Y662 390 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 IGHV3-20A0A0C4DH32 117 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 GMNCA6NCL1 334 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 OR10H2O60403 315 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 CYC1P08574 325 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ALDOCP09972 364 aaKnown RBP14.04□□□□□ -0.16
NUP54-213ENST00000513352 DDCP20711 480 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ARFIP2P53365 341 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 UCNP55089 124 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 TMPRSS3P57727 454 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 STX1BP61266 288 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ATP1A4Q13733 1029 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 SERTAD2Q14140 314 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 SFT2D3Q587I9 215 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ANKRD26P1Q6NSI1 321 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 FAM180BQ6P0A1 224 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 SLC48A1Q6P1K1 146 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 CPEB2Q7Z5Q1 589 aaKnown RBP14.04□□□□□ -0.16
NUP54-213ENST00000513352 PPP1R32Q7Z5V6 425 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ANKRD37Q7Z713 158 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 TICAM1Q8IUC6 712 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 OR4K14Q8NGD5 310 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ANKRD9Q96BM1 317 aaPredicted RBP14.04□□□□□ -0.16
NUP54-213ENST00000513352 PPCDCQ96CD2 204 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 DGAT2Q96PD7 388 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 MESP1Q9BRJ9 268 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 CCDC28BQ9BUN5 200 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 DPY30Q9C005 99 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 AIG1Q9NVV5 245 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ASIC5Q9NY37 505 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 FBXL4Q9UKA2 621 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ZMIZ1Q9ULJ6 1067 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 ENTPD4Q9Y227 616 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 WBP11Q9Y2W2 641 aaKnown RBP14.04□□□□□ -0.16
NUP54-213ENST00000513352 ZNF780BQ9Y6R6 833 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 WDFY3Q8IZQ1 3526 aa14.04□□□□□ -0.16
NUP54-213ENST00000513352 TPRP12270 2363 aaKnown RBP14.03□□□□□ -0.16
NUP54-213ENST00000513352 IGKV3D-11A0A0A0MRZ8 115 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 TGFBR3LH3BV60 316 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 SOCS6O14544 535 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 SEC24DO94855 1032 aaPredicted RBP14.03□□□□□ -0.16
NUP54-213ENST00000513352 GPR75O95800 540 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 FURINP09958 794 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 COX7A2P14406 83 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 TNNI3P19429 210 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 NCF2P19878 526 aaPredicted RBP14.03□□□□□ -0.16
NUP54-213ENST00000513352 NTSP30990 170 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 FEN1P39748 380 aaKnown RBP14.03□□□□□ -0.16
NUP54-213ENST00000513352 PLIN5Q00G26 463 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 ZNF750Q32MQ0 723 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 FAM9CQ8IZT9 166 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 KRTCAP2Q8N6L1 136 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 BBS4Q96RK4 519 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 ELAC2Q9BQ52 826 aaKnown RBP14.03□□□□□ -0.16
NUP54-213ENST00000513352 CNTNAP3Q9BZ76 1288 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 P4HTMQ9NXG6 502 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 KLHL14Q9P2G3 628 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 MAN2B2Q9Y2E5 1009 aa14.03□□□□□ -0.16
NUP54-213ENST00000513352 A0A087WV48 116 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 NSG1A0A0A6YYJ2 146 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 A0A1W2PS29 197 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 TCRBV16S1A1N1A0A5B0 115 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 SYNDIG1LA6NDD5 238 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 PCDH17O14917 1159 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 SCAMP2O15127 329 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 IDO1P14902 403 aa14.02□□□□□ -0.17
NUP54-213ENST00000513352 DDX5P17844 614 aaKnown RBP14.02□□□□□ -0.17
NUP54-213ENST00000513352 PRPS1L1P21108 318 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms