RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ZPBPQ9BS86 351 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 INPP5KQ9BT40 448 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TUBB6Q9BUF5 446 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 DDA1Q9BW61 102 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 ASPSCR1Q9BZE9 553 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 RPF2Q9H7B2 306 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 SLC35C2Q9NQQ7 365 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MRGBPQ9NV56 204 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 LYARQ9NX58 379 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 TAS2R1Q9NYW7 299 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 AKAP7Q9P0M2 348 aaPredicted RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 SH3BP4Q9P0V3 963 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 TAGLN3Q9UI15 199 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 CDV3Q9UKY7 258 aaKnown RBP5.6□□□□□ -1.51
USP39-213ENST00000467885 PADI1Q9ULC6 663 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SATB2Q9UPW6 733 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 NDUFAF1Q9Y375 327 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 MAP4K5Q9Y4K4 846 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 PCDHGA8Q9Y5G5 932 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 SPEGQ15772 3267 aa5.6□□□□□ -1.51
USP39-213ENST00000467885 RALGAPA1Q6GYQ0 2036 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 A0A088AWK7 358 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 MYOCOSA0A1B0GUC4 107 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 A0A1W2PRB8 838 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 DYTNA2CJ06 578 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 TRABD2BA6NFA1 517 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 B2RBV5 119 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 RNASET2O00584 256 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 SCAMP2O15127 329 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 RRP9O43818 475 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 B4GALT2O60909 372 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 KLF7O75840 302 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 STK17BO94768 372 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 KIAA0754O94854 1291 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CBX6O95503 412 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 DLGAP3O95886 979 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 NPPAP01160 153 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ALBP02768 609 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PGRP06401 933 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 KLK3P07288 261 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 ZGLP1P0C6A0 271 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 JMJD7P0C870 316 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 C8orf89P0DMQ9 161 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ESRRAP11474 423 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 BMP2P12643 396 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 RNH1P13489 461 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 HOXB9P17482 250 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 S1PR1P21453 382 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ZNF10P21506 573 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 TLX1P31314 330 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 FEN1P39748 380 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 TRPC1P48995 793 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 FOXL2P58012 376 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 RAB15P59190 212 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 STX1BP61266 288 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 RHAGQ02094 409 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ACTN3Q08043 901 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 RCAN2Q14206 197 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 MLC1Q15049 377 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 NKG7Q16617 165 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 FAM174BQ3ZCQ3 159 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CPZQ66K79 652 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SLC2A7Q6PXP3 512 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 IGF2-ASQ6U949 168 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 RINLQ6ZS11 566 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 GK5Q6ZS86 529 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 R3HCC1LQ7Z5L2 792 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 SNX32Q86XE0 403 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 DTX1Q86Y01 620 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ZNF595Q8IYB9 648 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 GALNT15Q8N3T1 639 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 MEIOBQ8N635 442 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 METTL27Q8N6F8 245 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 NATD1Q8N6N6 113 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 AMER2Q8N7J2 671 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 OR4K14Q8NGD5 310 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 GOT1L1Q8NHS2 421 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 PSMA8Q8TAA3 256 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SUN3Q8TAQ9 357 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 STT3BQ8TCJ2 826 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 OR5P2Q8WZ92 322 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CIDECQ96AQ7 238 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 PPWD1Q96BP3 646 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 TBC1D20Q96BZ9 403 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PPCDCQ96CD2 204 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CMTM5Q96DZ9 223 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SPDL1Q96EA4 605 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 AMDHD1Q96NU7 426 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 OR52E6Q96RD3 313 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CSF3RQ99062 836 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 NPAS2Q99743 824 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 DPH2Q9BQC3 489 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 GPATCH1Q9BRR8 931 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms