RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CDH13P55290 713 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 ALDH6A1Q02252 535 aaKnown RBP16.45■□□□□ 0.22
LSM5-204ENST00000409909 FOLH1Q04609 750 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 MILR1Q7Z6M3 343 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 TMEM156Q8N614 296 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 CPSF7Q8N684 471 aaKnown RBP16.45■□□□□ 0.22
LSM5-204ENST00000409909 ZNF721Q8TF20 911 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 MZB1Q8WU39 189 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 C1QTNF3Q9BXJ4 246 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 ZNF225Q9UK10 706 aa16.45■□□□□ 0.22
LSM5-204ENST00000409909 A0A1B0GUH1 482 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 GLOD5A6NK44 160 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 NPIPA5E9PKD4 350 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 GOLGA8RI6L899 631 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 HRKO00198 91 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 WWP2O00308 870 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 COL8A1P27658 744 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 TLX1P31314 330 aaPredicted RBP16.44■□□□□ 0.22
LSM5-204ENST00000409909 SSR4P51571 173 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 HK2P52789 917 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 RNF4P78317 190 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 GGTA1PQ4G0N0 100 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 LETMD1Q6P1Q0 360 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 MAMDC2Q7Z304 686 aaPredicted RBP16.44■□□□□ 0.22
LSM5-204ENST00000409909 SULF2Q8IWU5 870 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 CYP4Z2PQ8N1L4 340 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 DOK4Q8TEW6 326 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 TMEM125Q96AQ2 219 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 SENP5Q96HI0 755 aaPredicted RBP16.44■□□□□ 0.22
LSM5-204ENST00000409909 GPR137Q96N19 417 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 SERPINI1Q99574 410 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 L2HGDHQ9H9P8 463 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 FARSBQ9NSD9 589 aaKnown RBP16.44■□□□□ 0.22
LSM5-204ENST00000409909 LYARQ9NX58 379 aaKnown RBP16.44■□□□□ 0.22
LSM5-204ENST00000409909 FETUBQ9UGM5 382 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 NPIPA1Q9UND3 350 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 NOTCH2Q04721 2471 aa16.44■□□□□ 0.22
LSM5-204ENST00000409909 FOXO6A8MYZ6 492 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 DLX3O60479 287 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 ZNF354AO60765 605 aaPredicted RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 ZG16O60844 167 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 OR6B1O95007 311 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 SEMA3DO95025 777 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 HSD17B3P37058 310 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 BUD31P41223 144 aaPredicted RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 HERVK_113P63132 956 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 UNC50Q53HI1 259 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 KRTCAP3Q53RY4 240 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 SGO1Q5FBB7 561 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 NUDT13Q86X67 352 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 FAM98AQ8NCA5 519 aaKnown RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 OR8K3Q8NH51 312 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 TRPC4APQ8TEL6 797 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 RBM18Q96H35 190 aaKnown RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 DGAT2Q96PD7 388 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 RASL10BQ96S79 203 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 ERVK-6Q9BXR3 956 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 MRPL1Q9BYD6 325 aaKnown RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 PSMC3IPQ9P2W1 217 aaPredicted RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 TBK1Q9UHD2 729 aa16.43■□□□□ 0.22
LSM5-204ENST00000409909 KLF13Q9Y2Y9 288 aaPredicted RBP16.43■□□□□ 0.22
LSM5-204ENST00000409909 GTF3C1Q12789 2109 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 TRGV8A0A0C4DH27 118 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 IQANK1A0A1B0GTG1 560 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PGRMC2O15173 223 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 ZNHIT1O43257 154 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 ASNA1O43681 348 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PEX1O43933 1283 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 GPR75O95800 540 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 AIFM1O95831 613 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 OTCP00480 354 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PDYNP01213 254 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 IGKV3-11P04433 115 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 NR2F6P10588 404 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PYGBP11216 843 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 COX7A2P14406 83 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 ALOX15P16050 662 aaPredicted RBP16.42■□□□□ 0.22
LSM5-204ENST00000409909 RFC3P40938 356 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 SOX3P41225 446 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 MEOX1P50221 254 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PER3P56645 1201 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 CLCQ05315 142 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 IFT88Q13099 833 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 BIKQ13323 160 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 ZNF678Q5SXM1 525 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 IL20RBQ6UXL0 311 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 LCA5Q86VQ0 697 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 EIF1ADQ8N9N8 165 aaKnown RBP16.42■□□□□ 0.22
LSM5-204ENST00000409909 C7orf57Q8NEG2 295 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 ELOVL6Q9H5J4 265 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 DEPPQ9NTK1 212 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 TEX10Q9NXF1 929 aaPredicted RBP16.42■□□□□ 0.22
LSM5-204ENST00000409909 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 PCNX1Q96RV3 2341 aa16.42■□□□□ 0.22
LSM5-204ENST00000409909 A0A1W2PPM1 405 aa16.41■□□□□ 0.22
LSM5-204ENST00000409909 A0A1W2PS29 197 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms