RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 INTS11Q5TA45 600 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 FRMPD2BQ6IN97 320 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 TMEM214Q6NUQ4 689 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 BHLHB9Q6PI77 547 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ANGPTL8Q6UXH0 198 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 IZUMO2Q6UXV1 221 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 OR4N4Q8N0Y3 316 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ANKFN1Q8N957 763 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 TMEM102Q8N9M5 508 aaPredicted RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 DTWD2Q8NBA8 298 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ICA1LQ8NDH6 482 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 PSMA8Q8TAA3 256 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ZCCHC10Q8TBK6 192 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 LRTOMTQ8WZ04 291 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 NEURL3Q96EH8 262 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ZC3H10Q96K80 434 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 RNF145Q96MT1 663 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 SYNPO2LQ9H987 977 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 IL21RQ9HBE5 538 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 THUMPD1Q9NXG2 353 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 NLGN3Q9NZ94 848 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 CNOT11Q9UKZ1 510 aaKnown RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 FAF1Q9UNN5 650 aaPredicted RBP13.05□□□□□ -0.32
TPM1-215ENST00000558868 ERVK-11Q9UQG0 969 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 SNX8Q9Y5X2 465 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ZNF780BQ9Y6R6 833 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 RNF215Q9Y6U7 377 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 SPAG17Q6Q759 2223 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
TPM1-215ENST00000558868 RNF103-CHMP3A0A140T963 221 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 MYO1GB0I1T2 1018 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 DUX1O43812 170 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 TIPRLO75663 272 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 ATP6V1C1P21283 382 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PEX2P28328 305 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 MPIP34949 423 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 GPC1P35052 558 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 HSPA13P48723 471 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 PPP1CAP62136 330 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 TXNL4AP83876 142 aaKnown RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 TNFRSF17Q02223 184 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 BNIP3Q12983 259 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 SLC14A1Q13336 389 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 ELOAQ14241 798 aaKnown RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 NR1D2Q14995 579 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 ZNF630Q2M218 657 aaPredicted RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 DEFB134Q4QY38 66 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.04□□□□□ -0.32
TPM1-215ENST00000558868 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 SAXO2Q658L1 398 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 TMEM64Q6YI46 380 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PLXDC1Q8IUK5 500 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 SLC25A45Q8N413 288 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 DNAJC22Q8N4W6 341 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PNPT1Q8TCS8 783 aaKnown RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PIGKQ92643 395 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 EME1Q96AY2 570 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 CENPNQ96H22 339 aaPredicted RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 AMDHD1Q96NU7 426 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 SEPHS2Q99611 448 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 MAP3K3Q99759 626 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 MAPKAP1Q9BPZ7 522 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 DPH2Q9BQC3 489 aaPredicted RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 CHID1Q9BWS9 393 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 CHST8Q9H2A9 424 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 TMEM38AQ9H6F2 299 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 CXorf36Q9H7Y0 433 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 CLK4Q9HAZ1 481 aaKnown RBP13.04□□□□□ -0.32
TPM1-215ENST00000558868 PDE7BQ9NP56 450 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 AGPAT4Q9NRZ5 378 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PADI4Q9UM07 663 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 PLCL2Q9UPR0 1127 aa13.04□□□□□ -0.32
TPM1-215ENST00000558868 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 H0YJX3 145 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 HRO43593 1189 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 SH3BP5O60239 455 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 ABCB7O75027 752 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 DEAF1O75398 565 aaPredicted RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 ZBTB11O95625 1053 aaPredicted RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 SERPINA1P01009 418 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 LDLRP01130 860 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 IFNA14P01570 189 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 PNLIPP16233 465 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 EPHA8P29322 1005 aaPredicted RBP13.03□□□□□ -0.32
TPM1-215ENST00000558868 ALDH4A1P30038 563 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 KDELR2P33947 212 aa13.03□□□□□ -0.32
TPM1-215ENST00000558868 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms