RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SNAPC1Q16533 368 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 PHKG1Q16816 387 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 C15orf59Q2T9L4 293 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 GPR33Q49SQ1 333 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 CBWD6Q4V339 395 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 CBWD3Q5JTY5 395 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 TMEM31Q5JXX7 168 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 RSBN1Q5VWQ0 802 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 KHDRBS2Q5VWX1 349 aaKnown RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ANKRD33Q7Z3H0 272 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 RNF130Q86XS8 419 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 MCUQ8NE86 351 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 APPL2Q8NEU8 664 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 OR6J1Q8NGC5 347 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 PIBF1Q8WXW3 757 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 JAKMIP2Q96AA8 810 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 SPACA9Q96E40 222 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF830Q96NB3 372 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 PANK2Q9BZ23 570 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 KLHL4Q9C0H6 718 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ALDH8A1Q9H2A2 487 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 OLAHQ9NV23 265 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 DPP3Q9NY33 737 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 HOXC10Q9NYD6 342 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 MRPL15Q9P015 296 aaKnown RBP2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF581Q9P0T4 197 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 SWAP70Q9UH65 585 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 BAIAP2L1Q9UHR4 511 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 CCPG1Q9ULG6 757 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 STX8Q9UNK0 236 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 PADI2Q9Y2J8 665 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 SELENOKQ9Y6D0 94 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 LRRC37A2A6NM11 1700 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ZBED9Q6R2W3 1325 aa2.64□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF236Q9UL36 1845 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 ROBO3Q96MS0 1386 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 PLXNA1Q9UIW2 1896 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TRBV4-1A0A0J9YWV2 114 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 A0A1W2PQ72 361 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 OGTO15294 1046 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 IPO8O15397 1037 aaKnown RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SPRY1O43609 319 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 RANBP6O60518 1105 aaKnown RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TSPY3P0CV98 308 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TSPY8P0CW00 308 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF19P17023 458 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SLC1A4P43007 532 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 CLNS1AP54105 237 aaKnown RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SGCGQ13326 291 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TRIM29Q14134 588 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 GPNMBQ14956 572 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 NUP54Q7Z3B4 507 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 DNAAF5Q86Y56 855 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TBC1D10CQ8IV04 446 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 MYOCDQ8IZQ8 938 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 FAM89BQ8N5H3 189 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 CSNK1G2-AS1Q8NCQ2 148 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SYN2Q92777 582 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SFXN2Q96NB2 322 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 DGAT2Q96PD7 388 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 GPR88Q9GZN0 384 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 UBA5Q9GZZ9 404 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 UBE2ZQ9H832 354 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 SLC38A10Q9HBR0 1119 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 HAO2Q9NYQ3 351 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 RPS6KA6Q9UK32 745 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 RNF150Q9ULK6 438 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 TMEM5Q9Y2B1 443 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 MAGED1Q9Y5V3 778 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-219ENST00000556413 MYH1P12882 1939 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 NEDD4P46934 1319 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 FOCADQ5VW36 1801 aa2.63□□□□□ -1.99
SCFD1-219ENST00000556413 BAZ2AQ9UIF9 1905 aaKnown RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 TTC28Q96AY4 2481 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 A0A0D9SFI3 127 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 A0A1W2PPQ1 181 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 NEMP2A6NFY4 417 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 TSPY2A6NKD2 308 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 TRAFD1O14545 582 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 SURF4O15260 269 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 RNF113AO15541 343 aaKnown RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 PDGFBP01127 241 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 ATP1B1P05026 303 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 PFKFB1P16118 471 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 SELEP16581 610 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 CYP11B2P19099 503 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 CD27P26842 260 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 MAPK12P53778 367 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 RPS6P62753 249 aaKnown RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 IFI35P80217 286 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 IL11RAQ14626 422 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 PTGISQ16647 500 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 BMP2KLQ5H9B9 411 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 TCEAL5Q5H9L2 206 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 C6orf163Q5TEZ5 329 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 FCRLAQ7L513 359 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 ADGRD2Q7Z7M1 963 aa2.62□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF589Q86UQ0 364 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-219ENST00000556413 ZNF444Q8N0Y2 327 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms