RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 COQ10BQ9H8M1 238 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SP140LQ9H930 580 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 B3GAT2Q9NPZ5 323 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PANK4Q9NVE7 773 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 DCAF16Q9NXF7 216 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 NDE1Q9NXR1 346 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 AATFQ9NY61 560 aaKnown RBP eCLIP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 IL36AQ9UHA7 158 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TEKT2Q9UIF3 430 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ERVK-19Q9WJR5 959 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PYGO1Q9Y3Y4 419 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 R4GN57 208 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 FAM230AA0A1W2PPH8 454 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SERINC4A6NH21 518 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 MSGN1A6NI15 193 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 M0R296 226 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 MPHOSPH10O00566 681 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CHEK1O14757 476 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ARPC1BO15143 372 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PSMD3O43242 534 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ACSL4O60488 711 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ATP6V1G1O75348 118 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SPAG6O75602 509 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 STBD1O95210 358 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SEC24AO95486 1093 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 APBB3O95704 486 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 HPRP00739 348 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 TSPY4P0CV99 314 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 TSPY10P0CW01 314 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CT45A8P0DMV1 189 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CT45A9P0DMV2 189 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 F3P13726 295 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 NCF1P14598 390 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ANPEPP15144 967 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 FUT1P19526 365 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF10P21506 573 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PRKACGP22612 351 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 MARCKSP29966 332 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PKLRP30613 574 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SRD5A2P31213 254 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CAPGP40121 348 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 TNFRSF4P43489 277 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 IFNAR2P48551 515 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 LBX1P52954 281 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 KRTAP10-6P60371 365 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 GABPAQ06546 454 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ELAVL2Q12926 359 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SPP2Q13103 211 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SNX1Q13596 522 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 GIT2Q14161 759 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CEBPEQ15744 281 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF74Q16587 644 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CEP55Q53EZ4 464 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 TAF1BQ53T94 588 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 C2CD6Q53TS8 623 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CT45A2Q5DJT8 189 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 NKAIN2Q5VXU1 208 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 BHLHB9Q6PI77 547 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 FAM159AQ6UWV7 190 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ISLR2Q6UXK2 745 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CDHR3Q6ZTQ4 885 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CYP4V2Q6ZWL3 525 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CPEB2Q7Z5Q1 589 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF573Q86YE8 665 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 THEM5Q8N1Q8 247 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CERS5Q8N5B7 392 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 KLHDC1Q8N7A1 406 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 COLGALT1Q8NBJ5 622 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 OR7A2PQ8NGA2 310 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 OR2L2Q8NH16 312 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 OR4A16Q8NH70 328 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 OR1L3Q8NH93 324 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SLCO2A1Q92959 643 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RFT1Q96AA3 541 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ESAMQ96AP7 390 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RBM41Q96IZ5 413 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 C10orf90Q96M02 699 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 GPR137Q96N19 417 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 NECTIN4Q96NY8 510 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 TAAR6Q96RI8 345 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PCDHB18PQ96TA0 734 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CDCA3Q99618 268 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 COQ7Q99807 217 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CCDC3Q9BQI4 270 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PIGQQ9BRB3 760 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SYT11Q9BT88 431 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 FICDQ9BVA6 458 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 NUSAP1Q9BXS6 441 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 EGLN1Q9GZT9 426 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 HOXD1Q9GZZ0 328 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 THAP2Q9H0W7 228 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SIRPDQ9H106 197 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 C5orf66Q9H5L9 145 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RAVER2Q9HCJ3 691 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SPHK2Q9NRA0 654 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CENPMQ9NSP4 180 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RNF186Q9NXI6 227 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 CNOT2Q9NZN8 540 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 NARFQ9UHQ1 456 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms