RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GOLGA6L10A6NI86 522 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 SLC22A20A6NK97 555 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 E7EQL1 145 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 GOLGA6L19H0YKK7 550 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 KCNK1O00180 336 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 HAT1O14929 419 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 STX7O15400 261 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 DHHO43323 396 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 MFSD11O43934 449 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TRIM3O75382 744 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 ULK1O75385 1050 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PRSS23O95084 383 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 SNUPNO95149 360 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PNPP00491 289 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 OPN1MWP04001 364 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 RPN2P04844 631 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 CSF1P09603 554 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 OPN1MW2P0DN77 364 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 OPN1MW3P0DN78 364 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 ADH6P28332 368 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PPP2R1BP30154 601 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TLX1P31314 330 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 GCKP35557 465 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 STARP49675 285 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 FABP6P51161 128 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 EIF3BP55884 814 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 IRX6P78412 446 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TBL3Q12788 808 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TERF2Q15554 542 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TRIP10Q15642 601 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TAB1Q15750 504 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 CTU2Q2VPK5 515 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 ZNF791Q3KP31 576 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 RESP18Q5W5W9 173 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 OLFML2AQ68BL7 652 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 DNAJC24Q6P3W2 148 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 CYP4V2Q6ZWL3 525 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 C1QL2Q7Z5L3 287 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 ADCK2Q7Z695 626 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 CNTD1Q8N815 330 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 FAM83FQ8NEG4 500 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 OR10G3Q8NGC4 313 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 RNF217Q8TC41 542 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 HEXDCQ8WVB3 486 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TADA1Q96BN2 335 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 ULK4Q96C45 1275 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 CTHRC1Q96CG8 243 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 THAP11Q96EK4 314 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PDLIM2Q96JY6 352 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 SORCS2Q96PQ0 1159 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 DHRS9Q9BPW9 319 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 TRMOQ9BU70 441 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PLAC1Q9HBJ0 212 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PRDM9Q9NQV7 894 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 POU2F3Q9UKI9 436 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PPIEQ9UNP9 301 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 GPR52Q9Y2T5 361 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 C15orf41Q9Y2V0 281 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 SNX8Q9Y5X2 465 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PMF1-BGLAPU3KQ54 211 aa5.85□□□□□ -1.47
HDAC3-206ENST00000471968 PLECQ15149 4684 aaKnown RBP5.85□□□□□ -1.47
HDAC3-206ENST00000471968 C5orf63A6NC05 138 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 E7ENX8 843 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 EIF3FO00303 357 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 ABCD4O14678 606 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CHST10O43529 356 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 HCRTR2O43614 444 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 GFPT2O94808 682 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 F13A1P00488 732 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 MSMBP08118 114 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 GSTM1P09488 218 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 SELEP16581 610 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 CCNCP24863 283 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 MASP1P48740 699 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 GSTM4Q03013 218 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 LRRC63Q05C16 580 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 ZBTB17Q13105 803 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 BMPR2Q13873 1038 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 KRT81Q14533 505 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 TSNAXIP1Q2TAA8 658 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 KBTBD12Q3ZCT8 623 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 DCUN1D2Q6PH85 259 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 R3HCC1LQ7Z5L2 792 aaKnown RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 TRIM59Q8IWR1 403 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 PIANPQ8IYJ0 282 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 PIAS4Q8N2W9 510 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-206ENST00000471968 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 RAB42Q8N4Z0 105 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 SLC25A41Q8N5S1 370 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 KCT2Q8NC54 265 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 SPATA22Q8NHS9 363 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 MAGEC3Q8TD91 643 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 GATAD1Q8WUU5 269 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 DDB2Q92466 427 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 RHBDF1Q96CC6 855 aa5.84□□□□□ -1.47
HDAC3-206ENST00000471968 IMP4Q96G21 291 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms