RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 NPC1O15118 1278 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 AP2A2O94973 939 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 IFNW1P05000 195 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 ARAFP10398 606 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 PIPP12273 146 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 RHCEP18577 417 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 ETV3P41162 512 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 KIR2DL3P43628 341 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 MAPK8P45983 427 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM209AQ5JX71 171 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 Q6ZVL8 140 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 OXR1Q8N573 874 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 OR4D11Q8NGI4 311 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 KLHL6Q8WZ60 621 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 PPCDCQ96CD2 204 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 NDUFB11Q9NX14 153 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 OR10H3O60404 316 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 GPR37L1O60883 481 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 SLCO2B1O94956 709 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 BCHEP06276 602 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 ENDOUP21128 410 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 SNRPD1P62314 119 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 RUNX1T1Q06455 604 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 SYTL3Q4VX76 610 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 C22orf39Q6P5X5 142 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 Q6ZVU0 165 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 CMTM8Q8IZV2 173 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 NANOGP1Q8N7R0 232 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 GPR32P1Q8NGA4 272 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 C16orf78Q8WTQ4 265 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 MAGEB10Q96LZ2 347 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 WDFY2Q96P53 400 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 SMG9Q9H0W8 520 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 SEC14L4Q9UDX3 406 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 PLEKHB1Q9UF11 243 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 AP1M2Q9Y6Q5 423 aa11.18□□□□□ -0.62
PDZRN3-203ENST00000462146 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 A0A0G2JMP0 313 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TNFRSF10AO00220 468 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 PLA2G10O15496 165 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MPZL2O60487 215 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 KLK1P06870 262 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 OSMP13725 252 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 HSD3B1P14060 373 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 PCSK2P16519 638 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MYL9P24844 172 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ELAVL4P26378 380 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 HSD3B2P26439 372 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 GPC1P35052 558 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 PTPN5P54829 565 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SCN1BQ07699 218 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 RBBP4Q09028 425 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SAXO2Q658L1 398 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TRIM40Q6P9F5 258 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 OLIG3Q7RTU3 272 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 HMGN2P46Q86SG4 172 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TP53I13Q8NBR0 393 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF740Q8NDX6 193 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SIMC1Q8NDZ2 872 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 OR7G1Q8NGA0 311 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF461Q8TAF7 563 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MND1Q9BWT6 205 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 UCK2Q9BZX2 261 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 LINC00597Q9H2U6 94 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 CXorf36Q9H7Y0 433 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 MALT1Q9UDY8 824 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 SNX7Q9UNH6 387 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 DENND4CQ5VZ89 1909 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 KIAA1549LQ6ZVL6 1849 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 PRKYO43930 277 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TMCC2O75069 709 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 CPNE3O75131 537 aaKnown RBP11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ALX3O95076 343 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 IL3P08700 152 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 GJA1P17302 382 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 HLA-FP30511 346 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ETV5P41161 510 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ETV1P50549 477 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 TBPL1P62380 186 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 GPLD1P80108 840 aa11.17□□□□□ -0.62
PDZRN3-203ENST00000462146 ZNF630Q2M218 657 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms